Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 CT009510.1-201ENSMUST00000227972 270 ntBASIC17.13■□□□□ 0.33
Rrp1P56183 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rrp1P56183 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rrp1P56183 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rrp1P56183 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rrp1P56183 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Rrp1P56183 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC17.13■□□□□ 0.33
Rrp1P56183 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Rrp1P56183 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rrp1P56183 Gm37297-201ENSMUST00000192974 2384 ntBASIC17.13■□□□□ 0.33
Rrp1P56183 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rrp1P56183 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rrp1P56183 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rrp1P56183 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Rrp1P56183 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rrp1P56183 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Rrp1P56183 Gm45293-201ENSMUST00000209754 1812 ntBASIC17.12■□□□□ 0.33
Rrp1P56183 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Rrp1P56183 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Rrp1P56183 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Rrp1P56183 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rrp1P56183 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rrp1P56183 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Rrp1P56183 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rrp1P56183 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Rrp1P56183 AC093926.2-201ENSMUST00000214468 1228 ntBASIC17.12■□□□□ 0.33
Rrp1P56183 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rrp1P56183 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rrp1P56183 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rrp1P56183 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rrp1P56183 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rrp1P56183 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC17.12■□□□□ 0.33
Rrp1P56183 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rrp1P56183 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rrp1P56183 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rrp1P56183 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rrp1P56183 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC17.11■□□□□ 0.33
Rrp1P56183 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rrp1P56183 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rrp1P56183 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rrp1P56183 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rrp1P56183 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Rrp1P56183 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Rrp1P56183 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rrp1P56183 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rrp1P56183 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rrp1P56183 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rrp1P56183 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rrp1P56183 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rrp1P56183 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rrp1P56183 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.11■□□□□ 0.33
Rrp1P56183 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rrp1P56183 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rrp1P56183 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Rrp1P56183 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rrp1P56183 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rrp1P56183 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.11■□□□□ 0.33
Rrp1P56183 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rrp1P56183 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rrp1P56183 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rrp1P56183 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC17.11■□□□□ 0.33
Rrp1P56183 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rrp1P56183 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rrp1P56183 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rrp1P56183 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rrp1P56183 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC17.1■□□□□ 0.33
Rrp1P56183 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rrp1P56183 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rrp1P56183 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC17.1■□□□□ 0.33
Rrp1P56183 Gm15358-201ENSMUST00000119249 520 ntBASIC17.1■□□□□ 0.33
Rrp1P56183 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rrp1P56183 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rrp1P56183 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Rrp1P56183 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC17.1■□□□□ 0.33
Rrp1P56183 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.1■□□□□ 0.33
Rrp1P56183 AC122024.2-201ENSMUST00000220086 871 ntBASIC17.1■□□□□ 0.33
Rrp1P56183 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rrp1P56183 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rrp1P56183 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rrp1P56183 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rrp1P56183 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rrp1P56183 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC17.1■□□□□ 0.33
Rrp1P56183 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rrp1P56183 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Rrp1P56183 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rrp1P56183 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rrp1P56183 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rrp1P56183 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rrp1P56183 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rrp1P56183 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rrp1P56183 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rrp1P56183 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rrp1P56183 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.09■□□□□ 0.33
Rrp1P56183 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.09■□□□□ 0.33
Rrp1P56183 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rrp1P56183 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Rrp1P56183 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Rrp1P56183 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC17.09■□□□□ 0.33
Rrp1P56183 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rrp1P56183 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms