Protein–RNA interactions for Protein: P51944

Ccnf, Cyclin-F, mousemouse

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnfP51944 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CcnfP51944 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CcnfP51944 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CcnfP51944 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CcnfP51944 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CcnfP51944 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CcnfP51944 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CcnfP51944 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CcnfP51944 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CcnfP51944 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CcnfP51944 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CcnfP51944 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CcnfP51944 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CcnfP51944 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CcnfP51944 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CcnfP51944 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CcnfP51944 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CcnfP51944 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CcnfP51944 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.44□□□□□ -0.1
CcnfP51944 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
CcnfP51944 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CcnfP51944 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CcnfP51944 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.44□□□□□ -0.1
CcnfP51944 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CcnfP51944 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CcnfP51944 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CcnfP51944 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.44□□□□□ -0.1
CcnfP51944 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.44□□□□□ -0.1
CcnfP51944 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.44□□□□□ -0.1
CcnfP51944 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.44□□□□□ -0.1
CcnfP51944 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CcnfP51944 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.44□□□□□ -0.1
CcnfP51944 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CcnfP51944 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CcnfP51944 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CcnfP51944 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.44□□□□□ -0.1
CcnfP51944 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CcnfP51944 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CcnfP51944 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CcnfP51944 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CcnfP51944 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CcnfP51944 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.44□□□□□ -0.1
CcnfP51944 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CcnfP51944 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CcnfP51944 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CcnfP51944 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CcnfP51944 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CcnfP51944 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CcnfP51944 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CcnfP51944 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CcnfP51944 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CcnfP51944 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CcnfP51944 Gm8344-201ENSMUST00000119813 856 ntBASIC14.43□□□□□ -0.1
CcnfP51944 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.43□□□□□ -0.1
CcnfP51944 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.43□□□□□ -0.1
CcnfP51944 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.43□□□□□ -0.1
CcnfP51944 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CcnfP51944 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CcnfP51944 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CcnfP51944 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CcnfP51944 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CcnfP51944 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CcnfP51944 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CcnfP51944 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CcnfP51944 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CcnfP51944 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CcnfP51944 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CcnfP51944 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CcnfP51944 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
CcnfP51944 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CcnfP51944 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CcnfP51944 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CcnfP51944 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CcnfP51944 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CcnfP51944 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CcnfP51944 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CcnfP51944 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CcnfP51944 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.42□□□□□ -0.1
CcnfP51944 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.42□□□□□ -0.1
CcnfP51944 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CcnfP51944 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CcnfP51944 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CcnfP51944 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.42□□□□□ -0.1
CcnfP51944 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CcnfP51944 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CcnfP51944 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.42□□□□□ -0.1
CcnfP51944 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CcnfP51944 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CcnfP51944 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CcnfP51944 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CcnfP51944 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CcnfP51944 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.42□□□□□ -0.1
CcnfP51944 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CcnfP51944 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.42□□□□□ -0.1
CcnfP51944 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CcnfP51944 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CcnfP51944 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CcnfP51944 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CcnfP51944 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CcnfP51944 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms