Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shmt1P50431 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Shmt1P50431 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shmt1P50431 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Shmt1P50431 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Shmt1P50431 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shmt1P50431 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shmt1P50431 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.03■□□□□ 0.16
Shmt1P50431 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shmt1P50431 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Shmt1P50431 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Shmt1P50431 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shmt1P50431 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Shmt1P50431 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Shmt1P50431 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Shmt1P50431 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Shmt1P50431 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Shmt1P50431 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Shmt1P50431 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.02■□□□□ 0.16
Shmt1P50431 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Shmt1P50431 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Shmt1P50431 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Shmt1P50431 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC16.02■□□□□ 0.16
Shmt1P50431 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.02■□□□□ 0.16
Shmt1P50431 Gm9385-201ENSMUST00000117563 472 ntBASIC16.02■□□□□ 0.16
Shmt1P50431 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Shmt1P50431 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
Shmt1P50431 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Shmt1P50431 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Shmt1P50431 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC16.02■□□□□ 0.16
Shmt1P50431 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Shmt1P50431 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Shmt1P50431 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Shmt1P50431 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Shmt1P50431 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Shmt1P50431 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Shmt1P50431 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Shmt1P50431 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Shmt1P50431 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.02■□□□□ 0.15
Shmt1P50431 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Shmt1P50431 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.02■□□□□ 0.15
Shmt1P50431 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.02■□□□□ 0.15
Shmt1P50431 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Shmt1P50431 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shmt1P50431 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shmt1P50431 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shmt1P50431 Asic1-205ENSMUST00000228185 1818 ntBASIC16.01■□□□□ 0.15
Shmt1P50431 Gm5648-201ENSMUST00000122244 1587 ntBASIC16.01■□□□□ 0.15
Shmt1P50431 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.01■□□□□ 0.15
Shmt1P50431 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.01■□□□□ 0.15
Shmt1P50431 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shmt1P50431 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shmt1P50431 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shmt1P50431 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shmt1P50431 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.01■□□□□ 0.15
Shmt1P50431 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Shmt1P50431 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.01■□□□□ 0.15
Shmt1P50431 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Shmt1P50431 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
Shmt1P50431 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Shmt1P50431 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Shmt1P50431 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.01■□□□□ 0.15
Shmt1P50431 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shmt1P50431 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shmt1P50431 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.01■□□□□ 0.15
Shmt1P50431 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shmt1P50431 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Shmt1P50431 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16■□□□□ 0.15
Shmt1P50431 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16■□□□□ 0.15
Shmt1P50431 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Shmt1P50431 Celf4-206ENSMUST00000224553 1729 ntBASIC16■□□□□ 0.15
Shmt1P50431 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Shmt1P50431 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16■□□□□ 0.15
Shmt1P50431 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC16■□□□□ 0.15
Shmt1P50431 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Shmt1P50431 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC16■□□□□ 0.15
Shmt1P50431 AC164567.1-201ENSMUST00000219185 960 ntBASIC16■□□□□ 0.15
Shmt1P50431 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Shmt1P50431 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Shmt1P50431 Gm15500-202ENSMUST00000071641 1019 ntBASIC16■□□□□ 0.15
Shmt1P50431 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Shmt1P50431 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16■□□□□ 0.15
Shmt1P50431 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Shmt1P50431 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Shmt1P50431 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Shmt1P50431 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Shmt1P50431 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Shmt1P50431 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Shmt1P50431 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Shmt1P50431 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Shmt1P50431 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
Shmt1P50431 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.99■□□□□ 0.15
Shmt1P50431 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
Shmt1P50431 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Shmt1P50431 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Shmt1P50431 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.99■□□□□ 0.15
Shmt1P50431 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Shmt1P50431 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Shmt1P50431 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.99■□□□□ 0.15
Shmt1P50431 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms