Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rfx3P48381 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfx3P48381 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfx3P48381 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Rfx3P48381 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfx3P48381 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfx3P48381 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfx3P48381 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfx3P48381 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
Rfx3P48381 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfx3P48381 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfx3P48381 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfx3P48381 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.74□□□□□ -0.21
Rfx3P48381 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC13.74□□□□□ -0.21
Rfx3P48381 Gm17807-201ENSMUST00000186869 298 ntBASIC13.74□□□□□ -0.21
Rfx3P48381 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfx3P48381 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfx3P48381 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Rfx3P48381 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfx3P48381 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfx3P48381 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Rfx3P48381 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfx3P48381 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfx3P48381 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfx3P48381 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.74□□□□□ -0.21
Rfx3P48381 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfx3P48381 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rfx3P48381 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfx3P48381 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Rfx3P48381 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfx3P48381 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfx3P48381 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfx3P48381 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rfx3P48381 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfx3P48381 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfx3P48381 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfx3P48381 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Rfx3P48381 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.73□□□□□ -0.21
Rfx3P48381 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfx3P48381 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC13.73□□□□□ -0.21
Rfx3P48381 Gm9103-201ENSMUST00000119371 405 ntBASIC13.73□□□□□ -0.21
Rfx3P48381 Gm12895-201ENSMUST00000122214 226 ntBASIC13.73□□□□□ -0.21
Rfx3P48381 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC13.73□□□□□ -0.21
Rfx3P48381 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.73□□□□□ -0.21
Rfx3P48381 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.73□□□□□ -0.21
Rfx3P48381 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfx3P48381 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfx3P48381 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfx3P48381 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfx3P48381 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfx3P48381 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfx3P48381 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfx3P48381 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfx3P48381 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Rfx3P48381 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.73□□□□□ -0.21
Rfx3P48381 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Rfx3P48381 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Rfx3P48381 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfx3P48381 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfx3P48381 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rfx3P48381 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rfx3P48381 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Rfx3P48381 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfx3P48381 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rfx3P48381 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfx3P48381 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.72□□□□□ -0.21
Rfx3P48381 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfx3P48381 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfx3P48381 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfx3P48381 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Rfx3P48381 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Rfx3P48381 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rfx3P48381 Gm12497-201ENSMUST00000138778 237 ntBASIC13.72□□□□□ -0.21
Rfx3P48381 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.72□□□□□ -0.21
Rfx3P48381 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rfx3P48381 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfx3P48381 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfx3P48381 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfx3P48381 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfx3P48381 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfx3P48381 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rfx3P48381 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfx3P48381 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Rfx3P48381 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfx3P48381 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfx3P48381 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Rfx3P48381 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfx3P48381 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfx3P48381 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfx3P48381 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Rfx3P48381 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfx3P48381 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rfx3P48381 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.72□□□□□ -0.21
Rfx3P48381 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfx3P48381 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Rfx3P48381 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rfx3P48381 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Rfx3P48381 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Rfx3P48381 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rfx3P48381 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms