Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Mir6538-201ENSMUST00000183713 110 ntBASIC9.89□□□□□ -0.83
Xcl1P47993 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC9.89□□□□□ -0.83
Xcl1P47993 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Xcl1P47993 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Xcl1P47993 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Xcl1P47993 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Xcl1P47993 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Xcl1P47993 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC9.89□□□□□ -0.83
Xcl1P47993 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC9.89□□□□□ -0.83
Xcl1P47993 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC9.89□□□□□ -0.83
Xcl1P47993 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Xcl1P47993 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Xcl1P47993 Gm42769-201ENSMUST00000198576 1659 ntBASIC9.89□□□□□ -0.83
Xcl1P47993 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Xcl1P47993 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Xcl1P47993 AC162938.1-201ENSMUST00000213140 2323 ntBASIC9.89□□□□□ -0.83
Xcl1P47993 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Xcl1P47993 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Xcl1P47993 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Xcl1P47993 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Xcl1P47993 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Xcl1P47993 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC9.89□□□□□ -0.83
Xcl1P47993 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC9.89□□□□□ -0.83
Xcl1P47993 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC9.88□□□□□ -0.83
Xcl1P47993 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Xcl1P47993 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Xcl1P47993 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Xcl1P47993 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Xcl1P47993 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Xcl1P47993 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Xcl1P47993 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Xcl1P47993 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Xcl1P47993 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Xcl1P47993 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC9.88□□□□□ -0.83
Xcl1P47993 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC9.88□□□□□ -0.83
Xcl1P47993 Gm5408-201ENSMUST00000197998 747 ntBASIC9.88□□□□□ -0.83
Xcl1P47993 Gm42778-201ENSMUST00000199644 553 ntBASIC9.88□□□□□ -0.83
Xcl1P47993 Wdr70-203ENSMUST00000227371 1130 ntBASIC9.88□□□□□ -0.83
Xcl1P47993 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Xcl1P47993 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Xcl1P47993 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Xcl1P47993 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Xcl1P47993 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC9.88□□□□□ -0.83
Xcl1P47993 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Xcl1P47993 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC9.88□□□□□ -0.83
Xcl1P47993 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Xcl1P47993 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Xcl1P47993 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Xcl1P47993 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Xcl1P47993 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Xcl1P47993 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC9.88□□□□□ -0.83
Xcl1P47993 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Xcl1P47993 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Xcl1P47993 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Xcl1P47993 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Xcl1P47993 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC9.88□□□□□ -0.83
Xcl1P47993 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Xcl1P47993 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Xcl1P47993 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Xcl1P47993 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Xcl1P47993 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC9.87□□□□□ -0.83
Xcl1P47993 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Xcl1P47993 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Xcl1P47993 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Xcl1P47993 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Xcl1P47993 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Xcl1P47993 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Xcl1P47993 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Xcl1P47993 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Xcl1P47993 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Xcl1P47993 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Xcl1P47993 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Xcl1P47993 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Xcl1P47993 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC9.87□□□□□ -0.83
Xcl1P47993 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Xcl1P47993 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Xcl1P47993 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC9.87□□□□□ -0.83
Xcl1P47993 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC9.87□□□□□ -0.83
Xcl1P47993 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Xcl1P47993 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
Xcl1P47993 Gm17661-201ENSMUST00000170317 270 ntBASIC9.87□□□□□ -0.83
Xcl1P47993 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC9.87□□□□□ -0.83
Xcl1P47993 Gm9988-201ENSMUST00000069786 435 ntBASIC9.87□□□□□ -0.83
Xcl1P47993 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Xcl1P47993 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Xcl1P47993 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Xcl1P47993 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Xcl1P47993 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Xcl1P47993 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Xcl1P47993 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Xcl1P47993 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Xcl1P47993 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Xcl1P47993 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC9.87□□□□□ -0.83
Xcl1P47993 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Xcl1P47993 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Xcl1P47993 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Xcl1P47993 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Xcl1P47993 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Xcl1P47993 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Xcl1P47993 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC9.87□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms