Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx2-6P43688 Gm20553-201ENSMUST00000204205 844 ntBASIC14.35□□□□□ -0.11
Nkx2-6P43688 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx2-6P43688 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Nkx2-6P43688 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.35□□□□□ -0.11
Nkx2-6P43688 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx2-6P43688 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Nkx2-6P43688 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx2-6P43688 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx2-6P43688 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx2-6P43688 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Nkx2-6P43688 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx2-6P43688 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.34□□□□□ -0.11
Nkx2-6P43688 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx2-6P43688 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx2-6P43688 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx2-6P43688 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.34□□□□□ -0.11
Nkx2-6P43688 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.34□□□□□ -0.11
Nkx2-6P43688 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx2-6P43688 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx2-6P43688 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx2-6P43688 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx2-6P43688 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx2-6P43688 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx2-6P43688 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.34□□□□□ -0.11
Nkx2-6P43688 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.34□□□□□ -0.11
Nkx2-6P43688 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx2-6P43688 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx2-6P43688 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx2-6P43688 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Nkx2-6P43688 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.34□□□□□ -0.11
Nkx2-6P43688 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.34□□□□□ -0.11
Nkx2-6P43688 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Nkx2-6P43688 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx2-6P43688 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Nkx2-6P43688 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx2-6P43688 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx2-6P43688 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx2-6P43688 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx2-6P43688 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx2-6P43688 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Nkx2-6P43688 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx2-6P43688 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx2-6P43688 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx2-6P43688 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Nkx2-6P43688 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
Nkx2-6P43688 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Nkx2-6P43688 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nkx2-6P43688 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Nkx2-6P43688 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.33□□□□□ -0.11
Nkx2-6P43688 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nkx2-6P43688 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-6P43688 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-6P43688 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-6P43688 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-6P43688 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.33□□□□□ -0.12
Nkx2-6P43688 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-6P43688 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Nkx2-6P43688 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-6P43688 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.33□□□□□ -0.12
Nkx2-6P43688 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.33□□□□□ -0.12
Nkx2-6P43688 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.33□□□□□ -0.12
Nkx2-6P43688 Mir6990-201ENSMUST00000183724 91 ntBASIC14.33□□□□□ -0.12
Nkx2-6P43688 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-6P43688 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Nkx2-6P43688 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.33□□□□□ -0.12
Nkx2-6P43688 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-6P43688 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-6P43688 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Nkx2-6P43688 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-6P43688 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-6P43688 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-6P43688 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-6P43688 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-6P43688 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-6P43688 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-6P43688 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-6P43688 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Nkx2-6P43688 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-6P43688 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx2-6P43688 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-6P43688 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-6P43688 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-6P43688 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Nkx2-6P43688 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-6P43688 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-6P43688 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-6P43688 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-6P43688 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-6P43688 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.32□□□□□ -0.12
Nkx2-6P43688 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.32□□□□□ -0.12
Nkx2-6P43688 Gm16198-201ENSMUST00000118766 670 ntBASIC14.32□□□□□ -0.12
Nkx2-6P43688 Gm18889-201ENSMUST00000174284 929 ntBASIC14.32□□□□□ -0.12
Nkx2-6P43688 Gm44335-201ENSMUST00000196879 141 ntBASIC14.32□□□□□ -0.12
Nkx2-6P43688 Gm44297-201ENSMUST00000198304 141 ntBASIC14.32□□□□□ -0.12
Nkx2-6P43688 Gm44346-201ENSMUST00000198851 141 ntBASIC14.32□□□□□ -0.12
Nkx2-6P43688 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.32□□□□□ -0.12
Nkx2-6P43688 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-6P43688 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nkx2-6P43688 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms