Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.32□□□□□ -0.28
Upk2P38575 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk2P38575 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.32□□□□□ -0.28
Upk2P38575 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk2P38575 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk2P38575 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Upk2P38575 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Upk2P38575 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
Upk2P38575 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk2P38575 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk2P38575 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Upk2P38575 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk2P38575 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk2P38575 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk2P38575 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk2P38575 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Upk2P38575 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk2P38575 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.31□□□□□ -0.28
Upk2P38575 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Upk2P38575 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Upk2P38575 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.31□□□□□ -0.28
Upk2P38575 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Upk2P38575 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk2P38575 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk2P38575 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk2P38575 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk2P38575 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.31□□□□□ -0.28
Upk2P38575 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk2P38575 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Upk2P38575 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Upk2P38575 Gm28659-201ENSMUST00000188013 759 ntBASIC13.31□□□□□ -0.28
Upk2P38575 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk2P38575 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk2P38575 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Upk2P38575 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk2P38575 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk2P38575 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.31□□□□□ -0.28
Upk2P38575 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk2P38575 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk2P38575 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk2P38575 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Upk2P38575 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk2P38575 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk2P38575 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Upk2P38575 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk2P38575 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Upk2P38575 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk2P38575 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk2P38575 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Upk2P38575 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.3□□□□□ -0.28
Upk2P38575 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.3□□□□□ -0.28
Upk2P38575 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk2P38575 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk2P38575 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Upk2P38575 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Upk2P38575 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk2P38575 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk2P38575 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk2P38575 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk2P38575 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.3□□□□□ -0.28
Upk2P38575 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk2P38575 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Upk2P38575 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk2P38575 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk2P38575 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk2P38575 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Upk2P38575 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Upk2P38575 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Upk2P38575 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.3□□□□□ -0.28
Upk2P38575 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.3□□□□□ -0.28
Upk2P38575 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
Upk2P38575 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.3□□□□□ -0.28
Upk2P38575 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk2P38575 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13.3□□□□□ -0.28
Upk2P38575 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk2P38575 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk2P38575 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk2P38575 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk2P38575 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk2P38575 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk2P38575 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Upk2P38575 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk2P38575 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Upk2P38575 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Upk2P38575 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.3□□□□□ -0.28
Upk2P38575 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Upk2P38575 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Upk2P38575 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.29□□□□□ -0.28
Upk2P38575 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Upk2P38575 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Upk2P38575 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Upk2P38575 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upk2P38575 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upk2P38575 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Upk2P38575 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upk2P38575 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upk2P38575 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Upk2P38575 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Upk2P38575 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Upk2P38575 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms