Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a13P31649 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a13P31649 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a13P31649 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a13P31649 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Slc6a13P31649 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Slc6a13P31649 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a13P31649 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a13P31649 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.39■□□□□ 0.05
Slc6a13P31649 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Slc6a13P31649 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Slc6a13P31649 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Slc6a13P31649 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a13P31649 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.39■□□□□ 0.05
Slc6a13P31649 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Slc6a13P31649 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a13P31649 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a13P31649 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
Slc6a13P31649 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.39■□□□□ 0.05
Slc6a13P31649 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a13P31649 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.39■□□□□ 0.05
Slc6a13P31649 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a13P31649 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.39■□□□□ 0.05
Slc6a13P31649 Gm44771-201ENSMUST00000206975 626 ntBASIC15.39■□□□□ 0.05
Slc6a13P31649 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a13P31649 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.39■□□□□ 0.05
Slc6a13P31649 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a13P31649 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a13P31649 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Slc6a13P31649 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a13P31649 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a13P31649 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a13P31649 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a13P31649 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a13P31649 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a13P31649 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.39■□□□□ 0.05
Slc6a13P31649 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.39■□□□□ 0.05
Slc6a13P31649 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a13P31649 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc6a13P31649 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Slc6a13P31649 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Slc6a13P31649 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Slc6a13P31649 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Slc6a13P31649 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.38■□□□□ 0.05
Slc6a13P31649 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Slc6a13P31649 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Slc6a13P31649 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Slc6a13P31649 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Slc6a13P31649 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Slc6a13P31649 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Slc6a13P31649 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Slc6a13P31649 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Slc6a13P31649 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
Slc6a13P31649 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.38■□□□□ 0.05
Slc6a13P31649 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Slc6a13P31649 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Slc6a13P31649 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Slc6a13P31649 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.38■□□□□ 0.05
Slc6a13P31649 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.38■□□□□ 0.05
Slc6a13P31649 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.38■□□□□ 0.05
Slc6a13P31649 Psmb5-202ENSMUST00000227257 622 ntBASIC15.38■□□□□ 0.05
Slc6a13P31649 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Slc6a13P31649 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Slc6a13P31649 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Slc6a13P31649 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Slc6a13P31649 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Slc6a13P31649 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Slc6a13P31649 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Slc6a13P31649 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Slc6a13P31649 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Slc6a13P31649 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Slc6a13P31649 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Slc6a13P31649 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Slc6a13P31649 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Slc6a13P31649 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Slc6a13P31649 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Slc6a13P31649 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Slc6a13P31649 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
Slc6a13P31649 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.37■□□□□ 0.05
Slc6a13P31649 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Slc6a13P31649 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Slc6a13P31649 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Slc6a13P31649 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Slc6a13P31649 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
Slc6a13P31649 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Slc6a13P31649 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Slc6a13P31649 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.37■□□□□ 0.05
Slc6a13P31649 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Slc6a13P31649 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Slc6a13P31649 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Slc6a13P31649 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.37■□□□□ 0.05
Slc6a13P31649 Gm14140-201ENSMUST00000119999 995 ntBASIC15.37■□□□□ 0.05
Slc6a13P31649 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.37■□□□□ 0.05
Slc6a13P31649 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.37■□□□□ 0.05
Slc6a13P31649 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.37■□□□□ 0.05
Slc6a13P31649 AW822252-206ENSMUST00000208904 237 ntBASIC15.37■□□□□ 0.05
Slc6a13P31649 Gm5364-201ENSMUST00000216789 889 ntBASIC15.37■□□□□ 0.05
Slc6a13P31649 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.37■□□□□ 0.05
Slc6a13P31649 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Slc6a13P31649 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms