Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc6a1P31648 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc6a1P31648 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc6a1P31648 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Slc6a1P31648 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Slc6a1P31648 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Slc6a1P31648 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Slc6a1P31648 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc6a1P31648 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc6a1P31648 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc6a1P31648 Gm11355-201ENSMUST00000121120 306 ntBASIC13.1□□□□□ -0.31
Slc6a1P31648 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC13.1□□□□□ -0.31
Slc6a1P31648 Gm5587-201ENSMUST00000206270 674 ntBASIC13.1□□□□□ -0.31
Slc6a1P31648 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc6a1P31648 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Slc6a1P31648 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc6a1P31648 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc6a1P31648 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc6a1P31648 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc6a1P31648 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc6a1P31648 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Slc6a1P31648 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc6a1P31648 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc6a1P31648 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc6a1P31648 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Slc6a1P31648 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc6a1P31648 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc6a1P31648 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Slc6a1P31648 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Slc6a1P31648 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc6a1P31648 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc6a1P31648 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Slc6a1P31648 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
Slc6a1P31648 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc6a1P31648 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc6a1P31648 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc6a1P31648 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc6a1P31648 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc6a1P31648 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc6a1P31648 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc6a1P31648 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc6a1P31648 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.09□□□□□ -0.31
Slc6a1P31648 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.09□□□□□ -0.31
Slc6a1P31648 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc6a1P31648 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc6a1P31648 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Slc6a1P31648 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC13.09□□□□□ -0.31
Slc6a1P31648 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Slc6a1P31648 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC13.09□□□□□ -0.31
Slc6a1P31648 Gm6345-202ENSMUST00000180900 204 ntBASIC13.09□□□□□ -0.31
Slc6a1P31648 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Slc6a1P31648 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Slc6a1P31648 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc6a1P31648 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc6a1P31648 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Slc6a1P31648 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc6a1P31648 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc6a1P31648 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc6a1P31648 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc6a1P31648 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc6a1P31648 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc6a1P31648 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC13.09□□□□□ -0.31
Slc6a1P31648 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc6a1P31648 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc6a1P31648 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc6a1P31648 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc6a1P31648 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Slc6a1P31648 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Slc6a1P31648 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Slc6a1P31648 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Slc6a1P31648 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Slc6a1P31648 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Slc6a1P31648 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc6a1P31648 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc6a1P31648 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc6a1P31648 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc6a1P31648 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc6a1P31648 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc6a1P31648 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc6a1P31648 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc6a1P31648 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc6a1P31648 Gm14859-201ENSMUST00000117752 357 ntBASIC13.08□□□□□ -0.32
Slc6a1P31648 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC13.08□□□□□ -0.32
Slc6a1P31648 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Slc6a1P31648 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC13.08□□□□□ -0.32
Slc6a1P31648 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Slc6a1P31648 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc6a1P31648 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Slc6a1P31648 Gm7367-201ENSMUST00000057611 492 ntBASIC13.08□□□□□ -0.32
Slc6a1P31648 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Slc6a1P31648 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc6a1P31648 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc6a1P31648 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc6a1P31648 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc6a1P31648 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Slc6a1P31648 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Slc6a1P31648 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.08□□□□□ -0.32
Slc6a1P31648 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.08□□□□□ -0.32
Slc6a1P31648 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Slc6a1P31648 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms