Protein–RNA interactions for Protein: P30882

Ccl5, C-C motif chemokine 5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl5P30882 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Ccl5P30882 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccl5P30882 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.55■□□□□ 0.08
Ccl5P30882 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccl5P30882 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Ccl5P30882 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.54■□□□□ 0.08
Ccl5P30882 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccl5P30882 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccl5P30882 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccl5P30882 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccl5P30882 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ccl5P30882 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Ccl5P30882 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccl5P30882 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC15.54■□□□□ 0.08
Ccl5P30882 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccl5P30882 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Ccl5P30882 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC15.54■□□□□ 0.08
Ccl5P30882 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Ccl5P30882 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ccl5P30882 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccl5P30882 Gm44799-201ENSMUST00000207639 1202 ntBASIC15.54■□□□□ 0.08
Ccl5P30882 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Ccl5P30882 Gm9257-201ENSMUST00000221254 232 ntBASIC15.54■□□□□ 0.08
Ccl5P30882 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ccl5P30882 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccl5P30882 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccl5P30882 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.54■□□□□ 0.08
Ccl5P30882 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccl5P30882 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccl5P30882 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ccl5P30882 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ccl5P30882 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ccl5P30882 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Ccl5P30882 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccl5P30882 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccl5P30882 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ccl5P30882 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccl5P30882 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ccl5P30882 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccl5P30882 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccl5P30882 Iqck-206ENSMUST00000208658 2891 ntBASIC15.53■□□□□ 0.08
Ccl5P30882 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccl5P30882 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Ccl5P30882 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Ccl5P30882 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ccl5P30882 Gm13392-201ENSMUST00000117708 150 ntBASIC15.53■□□□□ 0.08
Ccl5P30882 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC15.53■□□□□ 0.08
Ccl5P30882 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccl5P30882 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC15.53■□□□□ 0.08
Ccl5P30882 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ccl5P30882 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC15.53■□□□□ 0.08
Ccl5P30882 Gm8835-201ENSMUST00000173096 1169 ntBASIC15.53■□□□□ 0.08
Ccl5P30882 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Ccl5P30882 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC15.53■□□□□ 0.08
Ccl5P30882 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.53■□□□□ 0.08
Ccl5P30882 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Ccl5P30882 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccl5P30882 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.53■□□□□ 0.08
Ccl5P30882 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Ccl5P30882 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccl5P30882 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccl5P30882 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccl5P30882 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccl5P30882 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.53■□□□□ 0.08
Ccl5P30882 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccl5P30882 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccl5P30882 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccl5P30882 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccl5P30882 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ccl5P30882 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccl5P30882 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccl5P30882 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.52■□□□□ 0.08
Ccl5P30882 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccl5P30882 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
Ccl5P30882 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC15.52■□□□□ 0.08
Ccl5P30882 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ccl5P30882 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ccl5P30882 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccl5P30882 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.52■□□□□ 0.08
Ccl5P30882 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC15.52■□□□□ 0.08
Ccl5P30882 Gm7820-201ENSMUST00000121012 1052 ntBASIC15.52■□□□□ 0.08
Ccl5P30882 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ccl5P30882 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Ccl5P30882 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC15.52■□□□□ 0.08
Ccl5P30882 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC15.52■□□□□ 0.08
Ccl5P30882 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC15.52■□□□□ 0.08
Ccl5P30882 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ccl5P30882 Gm42693-201ENSMUST00000196779 631 ntBASIC15.52■□□□□ 0.08
Ccl5P30882 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC15.52■□□□□ 0.08
Ccl5P30882 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC15.52■□□□□ 0.08
Ccl5P30882 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccl5P30882 AC150560.1-201ENSMUST00000227731 1187 ntBASIC15.52■□□□□ 0.08
Ccl5P30882 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Ccl5P30882 Gm5356-201ENSMUST00000093326 615 ntBASIC15.52■□□□□ 0.08
Ccl5P30882 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ccl5P30882 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ccl5P30882 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ccl5P30882 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ccl5P30882 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ccl5P30882 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms