Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm6222-201ENSMUST00000120787 396 ntBASIC17.05■□□□□ 0.32
Col2a1P28481 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col2a1P28481 Gm44344-201ENSMUST00000200287 129 ntBASIC17.05■□□□□ 0.32
Col2a1P28481 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col2a1P28481 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col2a1P28481 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col2a1P28481 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col2a1P28481 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.05■□□□□ 0.32
Col2a1P28481 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.05■□□□□ 0.32
Col2a1P28481 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
Col2a1P28481 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col2a1P28481 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col2a1P28481 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Col2a1P28481 Gm13127-201ENSMUST00000118978 1389 ntBASIC17.05■□□□□ 0.32
Col2a1P28481 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col2a1P28481 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col2a1P28481 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Col2a1P28481 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC17.05■□□□□ 0.32
Col2a1P28481 Gm9726-201ENSMUST00000180321 678 ntBASIC17.05■□□□□ 0.32
Col2a1P28481 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col2a1P28481 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col2a1P28481 Mir8102-201ENSMUST00000184148 139 ntBASIC17.05■□□□□ 0.32
Col2a1P28481 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col2a1P28481 Gm9182-201ENSMUST00000217829 639 ntBASIC17.05■□□□□ 0.32
Col2a1P28481 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col2a1P28481 Dupd1-202ENSMUST00000224735 548 ntBASIC17.05■□□□□ 0.32
Col2a1P28481 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col2a1P28481 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col2a1P28481 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col2a1P28481 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col2a1P28481 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col2a1P28481 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col2a1P28481 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col2a1P28481 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC17.04■□□□□ 0.32
Col2a1P28481 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.04■□□□□ 0.32
Col2a1P28481 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col2a1P28481 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col2a1P28481 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col2a1P28481 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Col2a1P28481 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Col2a1P28481 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col2a1P28481 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col2a1P28481 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col2a1P28481 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col2a1P28481 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC17.04■□□□□ 0.32
Col2a1P28481 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col2a1P28481 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col2a1P28481 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col2a1P28481 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col2a1P28481 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Col2a1P28481 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col2a1P28481 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col2a1P28481 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col2a1P28481 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col2a1P28481 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Col2a1P28481 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.03■□□□□ 0.32
Col2a1P28481 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col2a1P28481 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC17.03■□□□□ 0.32
Col2a1P28481 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Col2a1P28481 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Col2a1P28481 Gm27437-201ENSMUST00000183429 107 ntBASIC17.03■□□□□ 0.32
Col2a1P28481 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col2a1P28481 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC17.03■□□□□ 0.32
Col2a1P28481 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC17.03■□□□□ 0.32
Col2a1P28481 AC090659.2-201ENSMUST00000225378 1186 ntBASIC17.03■□□□□ 0.32
Col2a1P28481 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Col2a1P28481 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col2a1P28481 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC17.03■□□□□ 0.32
Col2a1P28481 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col2a1P28481 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col2a1P28481 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col2a1P28481 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col2a1P28481 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col2a1P28481 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col2a1P28481 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col2a1P28481 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col2a1P28481 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col2a1P28481 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Col2a1P28481 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.02■□□□□ 0.32
Col2a1P28481 AC124751.1-201ENSMUST00000222716 1408 ntBASIC17.02■□□□□ 0.32
Col2a1P28481 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col2a1P28481 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col2a1P28481 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Col2a1P28481 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Col2a1P28481 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col2a1P28481 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col2a1P28481 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Col2a1P28481 Gm15653-201ENSMUST00000119247 907 ntBASIC17.02■□□□□ 0.32
Col2a1P28481 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC17.02■□□□□ 0.32
Col2a1P28481 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Col2a1P28481 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC17.02■□□□□ 0.32
Col2a1P28481 AC125206.2-201ENSMUST00000217454 574 ntBASIC17.02■□□□□ 0.32
Col2a1P28481 Gm16476-201ENSMUST00000221544 139 ntBASIC17.02■□□□□ 0.32
Col2a1P28481 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC17.02■□□□□ 0.32
Col2a1P28481 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col2a1P28481 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col2a1P28481 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col2a1P28481 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col2a1P28481 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.02■□□□□ 0.31
Col2a1P28481 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms