Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col8a2P25318 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.67□□□□□ -0.38
Col8a2P25318 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.67□□□□□ -0.38
Col8a2P25318 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Col8a2P25318 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col8a2P25318 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Col8a2P25318 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col8a2P25318 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col8a2P25318 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.67□□□□□ -0.38
Col8a2P25318 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Col8a2P25318 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col8a2P25318 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col8a2P25318 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Col8a2P25318 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col8a2P25318 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col8a2P25318 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col8a2P25318 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col8a2P25318 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC12.67□□□□□ -0.38
Col8a2P25318 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col8a2P25318 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col8a2P25318 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Col8a2P25318 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Col8a2P25318 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Col8a2P25318 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col8a2P25318 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col8a2P25318 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.66□□□□□ -0.38
Col8a2P25318 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col8a2P25318 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Col8a2P25318 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col8a2P25318 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col8a2P25318 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col8a2P25318 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col8a2P25318 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col8a2P25318 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col8a2P25318 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col8a2P25318 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col8a2P25318 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col8a2P25318 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.66□□□□□ -0.38
Col8a2P25318 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.66□□□□□ -0.38
Col8a2P25318 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.66□□□□□ -0.38
Col8a2P25318 Mir8117-201ENSMUST00000184773 107 ntBASIC12.66□□□□□ -0.38
Col8a2P25318 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col8a2P25318 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col8a2P25318 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.66□□□□□ -0.38
Col8a2P25318 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col8a2P25318 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col8a2P25318 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col8a2P25318 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.66□□□□□ -0.38
Col8a2P25318 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col8a2P25318 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col8a2P25318 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Col8a2P25318 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col8a2P25318 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.66□□□□□ -0.38
Col8a2P25318 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col8a2P25318 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col8a2P25318 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Col8a2P25318 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Col8a2P25318 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Col8a2P25318 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Col8a2P25318 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col8a2P25318 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col8a2P25318 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col8a2P25318 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col8a2P25318 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col8a2P25318 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col8a2P25318 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col8a2P25318 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col8a2P25318 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col8a2P25318 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.65□□□□□ -0.38
Col8a2P25318 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col8a2P25318 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC12.65□□□□□ -0.38
Col8a2P25318 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.65□□□□□ -0.38
Col8a2P25318 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.65□□□□□ -0.38
Col8a2P25318 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Col8a2P25318 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Col8a2P25318 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col8a2P25318 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Col8a2P25318 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.65□□□□□ -0.38
Col8a2P25318 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col8a2P25318 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col8a2P25318 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col8a2P25318 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col8a2P25318 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col8a2P25318 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col8a2P25318 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col8a2P25318 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col8a2P25318 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col8a2P25318 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Col8a2P25318 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Col8a2P25318 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Col8a2P25318 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.64□□□□□ -0.39
Col8a2P25318 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Col8a2P25318 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col8a2P25318 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col8a2P25318 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col8a2P25318 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col8a2P25318 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col8a2P25318 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col8a2P25318 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Col8a2P25318 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms