Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Tnfrsf1aP25118 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Tnfrsf1aP25118 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.74□□□□□ -0.37
Tnfrsf1aP25118 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf1aP25118 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf1aP25118 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.74□□□□□ -0.37
Tnfrsf1aP25118 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf1aP25118 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf1aP25118 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf1aP25118 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf1aP25118 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf1aP25118 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf1aP25118 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf1aP25118 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Tnfrsf1aP25118 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf1aP25118 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf1aP25118 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf1aP25118 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf1aP25118 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf1aP25118 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf1aP25118 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf1aP25118 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf1aP25118 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf1aP25118 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf1aP25118 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Tnfrsf1aP25118 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf1aP25118 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf1aP25118 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf1aP25118 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Tnfrsf1aP25118 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf1aP25118 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Tnfrsf1aP25118 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf1aP25118 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.73□□□□□ -0.37
Tnfrsf1aP25118 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf1aP25118 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf1aP25118 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Tnfrsf1aP25118 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf1aP25118 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf1aP25118 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.73□□□□□ -0.37
Tnfrsf1aP25118 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf1aP25118 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf1aP25118 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf1aP25118 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf1aP25118 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf1aP25118 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf1aP25118 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf1aP25118 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf1aP25118 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf1aP25118 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf1aP25118 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf1aP25118 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf1aP25118 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf1aP25118 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf1aP25118 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf1aP25118 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Tnfrsf1aP25118 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf1aP25118 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.72□□□□□ -0.37
Tnfrsf1aP25118 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Tnfrsf1aP25118 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf1aP25118 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Tnfrsf1aP25118 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.72□□□□□ -0.37
Tnfrsf1aP25118 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC12.72□□□□□ -0.37
Tnfrsf1aP25118 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf1aP25118 Gm27741-201ENSMUST00000185060 237 ntBASIC12.72□□□□□ -0.37
Tnfrsf1aP25118 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.72□□□□□ -0.37
Tnfrsf1aP25118 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Tnfrsf1aP25118 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.72□□□□□ -0.37
Tnfrsf1aP25118 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf1aP25118 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf1aP25118 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.72□□□□□ -0.37
Tnfrsf1aP25118 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf1aP25118 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Tnfrsf1aP25118 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf1aP25118 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf1aP25118 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf1aP25118 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf1aP25118 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Tnfrsf1aP25118 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf1aP25118 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf1aP25118 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf1aP25118 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf1aP25118 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf1aP25118 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfrsf1aP25118 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfrsf1aP25118 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfrsf1aP25118 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfrsf1aP25118 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Tnfrsf1aP25118 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfrsf1aP25118 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfrsf1aP25118 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfrsf1aP25118 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfrsf1aP25118 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfrsf1aP25118 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfrsf1aP25118 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Tnfrsf1aP25118 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Tnfrsf1aP25118 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Tnfrsf1aP25118 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfrsf1aP25118 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC12.71□□□□□ -0.37
Tnfrsf1aP25118 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Tnfrsf1aP25118 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms