Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clk1P22518 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clk1P22518 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clk1P22518 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.16□□□□□ -0.14
Clk1P22518 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clk1P22518 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clk1P22518 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.15□□□□□ -0.14
Clk1P22518 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clk1P22518 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clk1P22518 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.15□□□□□ -0.14
Clk1P22518 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Clk1P22518 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Clk1P22518 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Clk1P22518 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Clk1P22518 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clk1P22518 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Clk1P22518 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.15□□□□□ -0.14
Clk1P22518 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Clk1P22518 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clk1P22518 Gm7153-201ENSMUST00000117092 455 ntBASIC14.15□□□□□ -0.14
Clk1P22518 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Clk1P22518 Gm43347-201ENSMUST00000200226 580 ntBASIC14.15□□□□□ -0.14
Clk1P22518 Gm34391-201ENSMUST00000203706 907 ntBASIC14.15□□□□□ -0.14
Clk1P22518 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.15□□□□□ -0.14
Clk1P22518 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.15□□□□□ -0.14
Clk1P22518 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clk1P22518 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Clk1P22518 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Clk1P22518 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Clk1P22518 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Clk1P22518 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Clk1P22518 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.15□□□□□ -0.14
Clk1P22518 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clk1P22518 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.15□□□□□ -0.14
Clk1P22518 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clk1P22518 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Clk1P22518 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Clk1P22518 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Clk1P22518 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clk1P22518 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Clk1P22518 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clk1P22518 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clk1P22518 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clk1P22518 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clk1P22518 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.15□□□□□ -0.15
Clk1P22518 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clk1P22518 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Clk1P22518 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clk1P22518 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Clk1P22518 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clk1P22518 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clk1P22518 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clk1P22518 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Clk1P22518 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clk1P22518 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clk1P22518 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clk1P22518 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clk1P22518 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clk1P22518 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clk1P22518 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Clk1P22518 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Clk1P22518 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clk1P22518 Gm8097-201ENSMUST00000117903 829 ntBASIC14.14□□□□□ -0.15
Clk1P22518 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.14□□□□□ -0.15
Clk1P22518 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clk1P22518 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.14□□□□□ -0.15
Clk1P22518 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Clk1P22518 Gm4535-201ENSMUST00000182274 558 ntBASIC14.14□□□□□ -0.15
Clk1P22518 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.14□□□□□ -0.15
Clk1P22518 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clk1P22518 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.14□□□□□ -0.15
Clk1P22518 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clk1P22518 Gm10355-201ENSMUST00000097146 517 ntBASIC14.14□□□□□ -0.15
Clk1P22518 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clk1P22518 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Clk1P22518 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clk1P22518 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clk1P22518 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Clk1P22518 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clk1P22518 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clk1P22518 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clk1P22518 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clk1P22518 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Clk1P22518 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clk1P22518 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clk1P22518 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clk1P22518 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clk1P22518 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clk1P22518 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clk1P22518 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Clk1P22518 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Clk1P22518 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clk1P22518 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clk1P22518 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clk1P22518 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Clk1P22518 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.13□□□□□ -0.15
Clk1P22518 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Clk1P22518 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Clk1P22518 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Clk1P22518 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms