Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Slc35b2-207ENSMUST00000226086 850 ntBASIC11.81□□□□□ -0.52
Ccl1P10146 AC135637.1-201ENSMUST00000227750 365 ntBASIC11.81□□□□□ -0.52
Ccl1P10146 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl1P10146 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl1P10146 Gm10566-201ENSMUST00000086739 996 ntBASIC11.81□□□□□ -0.52
Ccl1P10146 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl1P10146 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl1P10146 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl1P10146 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl1P10146 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl1P10146 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Ccl1P10146 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl1P10146 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl1P10146 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl1P10146 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl1P10146 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl1P10146 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl1P10146 Gm5049-201ENSMUST00000195878 1590 ntBASIC11.8□□□□□ -0.52
Ccl1P10146 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl1P10146 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ccl1P10146 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl1P10146 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl1P10146 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.8□□□□□ -0.52
Ccl1P10146 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Ccl1P10146 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl1P10146 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl1P10146 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl1P10146 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC11.8□□□□□ -0.52
Ccl1P10146 Gm3375-201ENSMUST00000203929 796 ntBASIC11.8□□□□□ -0.52
Ccl1P10146 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Ccl1P10146 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC11.8□□□□□ -0.52
Ccl1P10146 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC11.8□□□□□ -0.52
Ccl1P10146 Odf3b-204ENSMUST00000227834 930 ntBASIC11.8□□□□□ -0.52
Ccl1P10146 Gm7367-201ENSMUST00000057611 492 ntBASIC11.8□□□□□ -0.52
Ccl1P10146 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl1P10146 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl1P10146 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl1P10146 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl1P10146 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl1P10146 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl1P10146 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ccl1P10146 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl1P10146 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl1P10146 Spsb2-203ENSMUST00000112473 1322 ntBASIC11.8□□□□□ -0.52
Ccl1P10146 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl1P10146 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl1P10146 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl1P10146 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl1P10146 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl1P10146 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC11.8□□□□□ -0.52
Ccl1P10146 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ccl1P10146 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.8□□□□□ -0.52
Ccl1P10146 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl1P10146 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl1P10146 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ccl1P10146 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl1P10146 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl1P10146 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl1P10146 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl1P10146 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl1P10146 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl1P10146 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl1P10146 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl1P10146 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl1P10146 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Ccl1P10146 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl1P10146 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl1P10146 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl1P10146 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ccl1P10146 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC11.79□□□□□ -0.52
Ccl1P10146 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC11.79□□□□□ -0.52
Ccl1P10146 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC11.79□□□□□ -0.52
Ccl1P10146 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl1P10146 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl1P10146 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl1P10146 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC11.79□□□□□ -0.52
Ccl1P10146 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl1P10146 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Ccl1P10146 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl1P10146 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl1P10146 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl1P10146 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl1P10146 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl1P10146 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl1P10146 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl1P10146 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl1P10146 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl1P10146 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Ccl1P10146 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl1P10146 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl1P10146 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl1P10146 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC11.78□□□□□ -0.52
Ccl1P10146 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl1P10146 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl1P10146 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl1P10146 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC11.78□□□□□ -0.52
Ccl1P10146 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl1P10146 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl1P10146 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ccl1P10146 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms