Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
P06320 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
P06320 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
P06320 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
P06320 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
P06320 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
P06320 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
P06320 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
P06320 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
P06320 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
P06320 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
P06320 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
P06320 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
P06320 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC9.63□□□□□ -0.87
P06320 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
P06320 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
P06320 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
P06320 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
P06320 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
P06320 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
P06320 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
P06320 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
P06320 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC9.62□□□□□ -0.87
P06320 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
P06320 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
P06320 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC9.62□□□□□ -0.87
P06320 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
P06320 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
P06320 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
P06320 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
P06320 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
P06320 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
P06320 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
P06320 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
P06320 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
P06320 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC9.62□□□□□ -0.87
P06320 Mir1199-201ENSMUST00000117015 119 ntBASIC9.62□□□□□ -0.87
P06320 Gm11336-201ENSMUST00000118168 334 ntBASIC9.62□□□□□ -0.87
P06320 Gm12134-201ENSMUST00000122109 520 ntBASIC9.62□□□□□ -0.87
P06320 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC9.62□□□□□ -0.87
P06320 Gm27463-201ENSMUST00000183569 57 ntBASIC9.62□□□□□ -0.87
P06320 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
P06320 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC9.62□□□□□ -0.87
P06320 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
P06320 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
P06320 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
P06320 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
P06320 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
P06320 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
P06320 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
P06320 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
P06320 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
P06320 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
P06320 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC9.62□□□□□ -0.87
P06320 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
P06320 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
P06320 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
P06320 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
P06320 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
P06320 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC9.62□□□□□ -0.87
P06320 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC9.62□□□□□ -0.87
P06320 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
P06320 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
P06320 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
P06320 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
P06320 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC9.61□□□□□ -0.87
P06320 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
P06320 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
P06320 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
P06320 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
P06320 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
P06320 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
P06320 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
P06320 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
P06320 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
P06320 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
P06320 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
P06320 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
P06320 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC9.61□□□□□ -0.87
P06320 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC9.61□□□□□ -0.87
P06320 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
P06320 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
P06320 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
P06320 Otx2os1-204ENSMUST00000227221 751 ntBASIC9.61□□□□□ -0.87
P06320 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
P06320 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
P06320 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
P06320 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC9.61□□□□□ -0.87
P06320 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
P06320 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
P06320 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
P06320 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
P06320 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC9.61□□□□□ -0.87
P06320 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
P06320 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC9.61□□□□□ -0.87
P06320 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC9.61□□□□□ -0.87
P06320 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
P06320 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
P06320 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
P06320 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms