Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04940 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P04940 Sybu-209ENSMUST00000228639 4113 ntBASIC12.3□□□□□ -0.44
P04940 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
P04940 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.3□□□□□ -0.44
P04940 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04940 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04940 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04940 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
P04940 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
P04940 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04940 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
P04940 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
P04940 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
P04940 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04940 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
P04940 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04940 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.3□□□□□ -0.44
P04940 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
P04940 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
P04940 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
P04940 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
P04940 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
P04940 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04940 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC12.3□□□□□ -0.44
P04940 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
P04940 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.3□□□□□ -0.44
P04940 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04940 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04940 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
P04940 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04940 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04940 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC12.3□□□□□ -0.44
P04940 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.3□□□□□ -0.44
P04940 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04940 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04940 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04940 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
P04940 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04940 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04940 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04940 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04940 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P04940 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
P04940 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04940 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04940 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04940 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04940 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.29□□□□□ -0.44
P04940 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04940 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04940 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04940 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
P04940 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04940 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04940 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04940 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
P04940 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.29□□□□□ -0.44
P04940 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
P04940 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12.29□□□□□ -0.44
P04940 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC12.29□□□□□ -0.44
P04940 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC12.29□□□□□ -0.44
P04940 AC084391.1-201ENSMUST00000200651 141 ntBASIC12.29□□□□□ -0.44
P04940 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.29□□□□□ -0.44
P04940 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04940 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04940 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04940 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04940 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04940 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
P04940 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.29□□□□□ -0.44
P04940 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04940 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04940 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.29□□□□□ -0.44
P04940 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04940 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04940 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
P04940 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.29□□□□□ -0.44
P04940 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04940 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.28□□□□□ -0.44
P04940 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P04940 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.28□□□□□ -0.44
P04940 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
P04940 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
P04940 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P04940 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P04940 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
P04940 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P04940 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
P04940 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P04940 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
P04940 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P04940 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
P04940 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.28□□□□□ -0.44
P04940 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
P04940 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
P04940 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P04940 Mir5131-201ENSMUST00000175426 93 ntBASIC12.28□□□□□ -0.44
P04940 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P04940 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms