Protein–RNA interactions for Protein: P03980

Ig heavy chain V region TEPC 1017, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P03980 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC11.75□□□□□ -0.53
P03980 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
P03980 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
P03980 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
P03980 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
P03980 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
P03980 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
P03980 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P03980 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P03980 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
P03980 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P03980 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P03980 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
P03980 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P03980 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P03980 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
P03980 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
P03980 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
P03980 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
P03980 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P03980 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
P03980 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P03980 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P03980 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P03980 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P03980 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
P03980 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
P03980 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
P03980 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
P03980 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P03980 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
P03980 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P03980 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P03980 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P03980 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
P03980 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P03980 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P03980 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P03980 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P03980 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
P03980 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P03980 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P03980 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC11.74□□□□□ -0.53
P03980 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
P03980 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC11.74□□□□□ -0.53
P03980 AC159093.1-201ENSMUST00000227779 380 ntBASIC11.74□□□□□ -0.53
P03980 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P03980 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
P03980 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P03980 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P03980 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
P03980 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P03980 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
P03980 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
P03980 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
P03980 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P03980 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P03980 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
P03980 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
P03980 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
P03980 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
P03980 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P03980 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P03980 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P03980 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P03980 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
P03980 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P03980 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P03980 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P03980 Gm15565-201ENSMUST00000118890 427 ntBASIC11.73□□□□□ -0.53
P03980 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
P03980 Gm9013-201ENSMUST00000132939 882 ntBASIC11.73□□□□□ -0.53
P03980 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P03980 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P03980 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
P03980 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC11.73□□□□□ -0.53
P03980 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
P03980 AC153881.2-201ENSMUST00000214877 204 ntBASIC11.73□□□□□ -0.53
P03980 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P03980 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P03980 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
P03980 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P03980 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
P03980 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P03980 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
P03980 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P03980 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P03980 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P03980 AC148324.1-201ENSMUST00000219034 4240 ntBASIC11.73□□□□□ -0.53
P03980 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P03980 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
P03980 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P03980 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
P03980 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P03980 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC11.73□□□□□ -0.53
P03980 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P03980 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
P03980 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P03980 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC11.72□□□□□ -0.53
P03980 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms