Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col4a1P02463 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col4a1P02463 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col4a1P02463 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
Col4a1P02463 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC18.44■□□□□ 0.54
Col4a1P02463 Cd63-ps-201ENSMUST00000145417 875 ntBASIC18.44■□□□□ 0.54
Col4a1P02463 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Col4a1P02463 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Col4a1P02463 Gm27631-201ENSMUST00000184163 466 ntBASIC18.44■□□□□ 0.54
Col4a1P02463 AC090659.2-201ENSMUST00000225378 1186 ntBASIC18.44■□□□□ 0.54
Col4a1P02463 Mxra8os-201ENSMUST00000097740 687 ntBASIC18.44■□□□□ 0.54
Col4a1P02463 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Col4a1P02463 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col4a1P02463 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col4a1P02463 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Col4a1P02463 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Col4a1P02463 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Col4a1P02463 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col4a1P02463 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col4a1P02463 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.43■□□□□ 0.54
Col4a1P02463 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC18.43■□□□□ 0.54
Col4a1P02463 AL593843.1-201ENSMUST00000195891 145 ntBASIC18.43■□□□□ 0.54
Col4a1P02463 Gm45098-201ENSMUST00000207179 657 ntBASIC18.43■□□□□ 0.54
Col4a1P02463 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC18.43■□□□□ 0.54
Col4a1P02463 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col4a1P02463 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Col4a1P02463 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Col4a1P02463 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col4a1P02463 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col4a1P02463 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col4a1P02463 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Col4a1P02463 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col4a1P02463 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col4a1P02463 Gm5320-201ENSMUST00000207163 1519 ntBASIC18.42■□□□□ 0.54
Col4a1P02463 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col4a1P02463 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Col4a1P02463 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC18.42■□□□□ 0.54
Col4a1P02463 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
Col4a1P02463 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col4a1P02463 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.42■□□□□ 0.54
Col4a1P02463 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col4a1P02463 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col4a1P02463 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Col4a1P02463 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC18.42■□□□□ 0.54
Col4a1P02463 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC18.42■□□□□ 0.54
Col4a1P02463 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC18.42■□□□□ 0.54
Col4a1P02463 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col4a1P02463 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col4a1P02463 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col4a1P02463 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Col4a1P02463 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col4a1P02463 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Col4a1P02463 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col4a1P02463 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
Col4a1P02463 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Col4a1P02463 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Col4a1P02463 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Col4a1P02463 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC18.41■□□□□ 0.54
Col4a1P02463 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a1P02463 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a1P02463 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Col4a1P02463 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a1P02463 Gm14042-201ENSMUST00000120139 833 ntBASIC18.41■□□□□ 0.54
Col4a1P02463 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a1P02463 Gm6222-201ENSMUST00000120787 396 ntBASIC18.41■□□□□ 0.54
Col4a1P02463 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a1P02463 Olfr286-202ENSMUST00000205305 969 ntBASIC18.41■□□□□ 0.54
Col4a1P02463 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Col4a1P02463 AC135669.1-201ENSMUST00000213585 412 ntBASIC18.41■□□□□ 0.54
Col4a1P02463 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
Col4a1P02463 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a1P02463 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a1P02463 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a1P02463 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a1P02463 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a1P02463 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a1P02463 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a1P02463 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.41■□□□□ 0.54
Col4a1P02463 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Col4a1P02463 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a1P02463 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a1P02463 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a1P02463 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a1P02463 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a1P02463 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC18.41■□□□□ 0.54
Col4a1P02463 Gm12490-201ENSMUST00000120255 560 ntBASIC18.41■□□□□ 0.54
Col4a1P02463 Gm12138-201ENSMUST00000122180 951 ntBASIC18.41■□□□□ 0.54
Col4a1P02463 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC18.41■□□□□ 0.54
Col4a1P02463 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a1P02463 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Col4a1P02463 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a1P02463 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a1P02463 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col4a1P02463 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col4a1P02463 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col4a1P02463 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col4a1P02463 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Col4a1P02463 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col4a1P02463 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col4a1P02463 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms