Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Syn1O88935 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Syn1O88935 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Syn1O88935 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Syn1O88935 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Syn1O88935 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Syn1O88935 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Syn1O88935 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Syn1O88935 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Syn1O88935 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Syn1O88935 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Syn1O88935 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC15.58■□□□□ 0.08
Syn1O88935 Gm13015-201ENSMUST00000118674 204 ntBASIC15.58■□□□□ 0.08
Syn1O88935 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Syn1O88935 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Syn1O88935 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Syn1O88935 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.58■□□□□ 0.08
Syn1O88935 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC15.58■□□□□ 0.08
Syn1O88935 Gm6266-201ENSMUST00000203844 806 ntBASIC15.58■□□□□ 0.08
Syn1O88935 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.58■□□□□ 0.08
Syn1O88935 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Syn1O88935 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.58■□□□□ 0.08
Syn1O88935 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Syn1O88935 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Syn1O88935 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Syn1O88935 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Syn1O88935 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Syn1O88935 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.58■□□□□ 0.08
Syn1O88935 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Syn1O88935 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Syn1O88935 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Syn1O88935 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Syn1O88935 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Syn1O88935 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Syn1O88935 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Syn1O88935 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.57■□□□□ 0.08
Syn1O88935 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Syn1O88935 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC15.57■□□□□ 0.08
Syn1O88935 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC15.57■□□□□ 0.08
Syn1O88935 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Syn1O88935 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC15.57■□□□□ 0.08
Syn1O88935 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Syn1O88935 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Syn1O88935 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Syn1O88935 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Syn1O88935 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.57■□□□□ 0.08
Syn1O88935 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Syn1O88935 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Syn1O88935 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Syn1O88935 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Syn1O88935 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Syn1O88935 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
Syn1O88935 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Syn1O88935 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Syn1O88935 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Syn1O88935 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Syn1O88935 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Syn1O88935 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Syn1O88935 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Syn1O88935 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Syn1O88935 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.56■□□□□ 0.08
Syn1O88935 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC15.56■□□□□ 0.08
Syn1O88935 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Syn1O88935 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Syn1O88935 Gm24694-201ENSMUST00000180054 110 ntBASIC15.56■□□□□ 0.08
Syn1O88935 Gm8116-201ENSMUST00000182917 1201 ntBASIC15.56■□□□□ 0.08
Syn1O88935 Gm27680-201ENSMUST00000184192 160 ntBASIC15.56■□□□□ 0.08
Syn1O88935 Gm27663-201ENSMUST00000184839 110 ntBASIC15.56■□□□□ 0.08
Syn1O88935 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Syn1O88935 Gm18766-201ENSMUST00000189811 808 ntBASIC15.56■□□□□ 0.08
Syn1O88935 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Syn1O88935 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Syn1O88935 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Syn1O88935 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Syn1O88935 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Syn1O88935 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Syn1O88935 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Syn1O88935 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Syn1O88935 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Syn1O88935 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Syn1O88935 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Syn1O88935 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Syn1O88935 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Syn1O88935 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
Syn1O88935 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Syn1O88935 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Syn1O88935 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Syn1O88935 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Syn1O88935 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Syn1O88935 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Syn1O88935 Gm9115-201ENSMUST00000120192 1348 ntBASIC15.55■□□□□ 0.08
Syn1O88935 Gm4204-201ENSMUST00000110798 1231 ntBASIC15.55■□□□□ 0.08
Syn1O88935 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Syn1O88935 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC15.55■□□□□ 0.08
Syn1O88935 Gm10499-201ENSMUST00000174094 934 ntBASIC15.55■□□□□ 0.08
Syn1O88935 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Syn1O88935 Gm18018-201ENSMUST00000198273 408 ntBASIC15.55■□□□□ 0.08
Syn1O88935 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Syn1O88935 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Syn1O88935 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms