Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hdac3O88895 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.61□□□□□ -0.23
Hdac3O88895 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC13.61□□□□□ -0.23
Hdac3O88895 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.61□□□□□ -0.23
Hdac3O88895 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Hdac3O88895 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.61□□□□□ -0.23
Hdac3O88895 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Hdac3O88895 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hdac3O88895 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hdac3O88895 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hdac3O88895 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hdac3O88895 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hdac3O88895 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Hdac3O88895 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Hdac3O88895 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC13.61□□□□□ -0.23
Hdac3O88895 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hdac3O88895 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Hdac3O88895 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Hdac3O88895 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.61□□□□□ -0.23
Hdac3O88895 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.61□□□□□ -0.23
Hdac3O88895 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Hdac3O88895 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hdac3O88895 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hdac3O88895 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hdac3O88895 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hdac3O88895 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Hdac3O88895 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Hdac3O88895 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hdac3O88895 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hdac3O88895 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hdac3O88895 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hdac3O88895 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hdac3O88895 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hdac3O88895 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hdac3O88895 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hdac3O88895 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hdac3O88895 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hdac3O88895 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hdac3O88895 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hdac3O88895 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hdac3O88895 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hdac3O88895 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Hdac3O88895 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hdac3O88895 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hdac3O88895 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hdac3O88895 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hdac3O88895 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hdac3O88895 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hdac3O88895 Gm9103-201ENSMUST00000119371 405 ntBASIC13.6□□□□□ -0.23
Hdac3O88895 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC13.6□□□□□ -0.23
Hdac3O88895 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Hdac3O88895 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Hdac3O88895 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Hdac3O88895 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hdac3O88895 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.6□□□□□ -0.23
Hdac3O88895 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.6□□□□□ -0.23
Hdac3O88895 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Hdac3O88895 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Hdac3O88895 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hdac3O88895 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Hdac3O88895 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Hdac3O88895 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hdac3O88895 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hdac3O88895 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hdac3O88895 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hdac3O88895 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Hdac3O88895 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hdac3O88895 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hdac3O88895 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hdac3O88895 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hdac3O88895 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Hdac3O88895 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hdac3O88895 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hdac3O88895 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Hdac3O88895 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hdac3O88895 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hdac3O88895 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hdac3O88895 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hdac3O88895 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hdac3O88895 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC13.59□□□□□ -0.23
Hdac3O88895 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hdac3O88895 Gm28033-201ENSMUST00000184224 96 ntBASIC13.59□□□□□ -0.23
Hdac3O88895 Gm27867-201ENSMUST00000184778 125 ntBASIC13.59□□□□□ -0.23
Hdac3O88895 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.59□□□□□ -0.23
Hdac3O88895 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.59□□□□□ -0.23
Hdac3O88895 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hdac3O88895 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hdac3O88895 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hdac3O88895 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Hdac3O88895 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hdac3O88895 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hdac3O88895 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hdac3O88895 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hdac3O88895 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Hdac3O88895 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Hdac3O88895 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Hdac3O88895 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Hdac3O88895 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Hdac3O88895 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Hdac3O88895 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms