Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Best1O88870 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Best1O88870 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Best1O88870 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Best1O88870 Gm25287-201ENSMUST00000103846 110 ntBASIC14.54□□□□□ -0.08
Best1O88870 Gm22918-201ENSMUST00000103855 110 ntBASIC14.54□□□□□ -0.08
Best1O88870 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Best1O88870 Gm14701-201ENSMUST00000117156 348 ntBASIC14.54□□□□□ -0.08
Best1O88870 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.54□□□□□ -0.08
Best1O88870 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Best1O88870 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Best1O88870 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Best1O88870 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Best1O88870 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Best1O88870 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Best1O88870 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Best1O88870 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Best1O88870 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Best1O88870 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Best1O88870 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Best1O88870 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Best1O88870 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Best1O88870 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Best1O88870 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.53□□□□□ -0.08
Best1O88870 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Best1O88870 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Best1O88870 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Best1O88870 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Best1O88870 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.53□□□□□ -0.08
Best1O88870 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Best1O88870 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Best1O88870 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Best1O88870 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.53□□□□□ -0.08
Best1O88870 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Best1O88870 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Best1O88870 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Best1O88870 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Best1O88870 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Best1O88870 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.53□□□□□ -0.08
Best1O88870 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.53□□□□□ -0.08
Best1O88870 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Best1O88870 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.53□□□□□ -0.08
Best1O88870 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Best1O88870 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.53□□□□□ -0.08
Best1O88870 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Best1O88870 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.53□□□□□ -0.08
Best1O88870 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.53□□□□□ -0.08
Best1O88870 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.53□□□□□ -0.08
Best1O88870 Gm43125-201ENSMUST00000201724 730 ntBASIC14.53□□□□□ -0.08
Best1O88870 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.53□□□□□ -0.08
Best1O88870 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.53□□□□□ -0.08
Best1O88870 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Best1O88870 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.53□□□□□ -0.08
Best1O88870 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Best1O88870 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.53□□□□□ -0.08
Best1O88870 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Best1O88870 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Best1O88870 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Best1O88870 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Best1O88870 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Best1O88870 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Best1O88870 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Best1O88870 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Best1O88870 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Best1O88870 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Best1O88870 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Best1O88870 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Best1O88870 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Best1O88870 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Best1O88870 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Best1O88870 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Best1O88870 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Best1O88870 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.52□□□□□ -0.09
Best1O88870 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.52□□□□□ -0.09
Best1O88870 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.52□□□□□ -0.09
Best1O88870 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.52□□□□□ -0.09
Best1O88870 Gm43474-201ENSMUST00000196415 774 ntBASIC14.52□□□□□ -0.09
Best1O88870 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.52□□□□□ -0.09
Best1O88870 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.52□□□□□ -0.09
Best1O88870 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.52□□□□□ -0.09
Best1O88870 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Best1O88870 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Best1O88870 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Best1O88870 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Best1O88870 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Best1O88870 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Best1O88870 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Best1O88870 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Best1O88870 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Best1O88870 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Best1O88870 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Best1O88870 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Best1O88870 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Best1O88870 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Best1O88870 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Best1O88870 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.51□□□□□ -0.09
Best1O88870 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Best1O88870 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Best1O88870 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Best1O88870 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms