Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Lmx1bO88609 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lmx1bO88609 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Lmx1bO88609 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lmx1bO88609 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lmx1bO88609 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lmx1bO88609 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lmx1bO88609 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Lmx1bO88609 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Lmx1bO88609 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lmx1bO88609 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lmx1bO88609 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lmx1bO88609 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lmx1bO88609 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Lmx1bO88609 Gm17271-201ENSMUST00000165535 355 ntBASIC13.76□□□□□ -0.21
Lmx1bO88609 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.76□□□□□ -0.21
Lmx1bO88609 Gm44492-201ENSMUST00000197012 141 ntBASIC13.76□□□□□ -0.21
Lmx1bO88609 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.76□□□□□ -0.21
Lmx1bO88609 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lmx1bO88609 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Lmx1bO88609 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Lmx1bO88609 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.76□□□□□ -0.21
Lmx1bO88609 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lmx1bO88609 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lmx1bO88609 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Lmx1bO88609 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Lmx1bO88609 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Lmx1bO88609 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lmx1bO88609 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lmx1bO88609 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lmx1bO88609 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lmx1bO88609 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Lmx1bO88609 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lmx1bO88609 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lmx1bO88609 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lmx1bO88609 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lmx1bO88609 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lmx1bO88609 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Lmx1bO88609 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.75□□□□□ -0.21
Lmx1bO88609 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.75□□□□□ -0.21
Lmx1bO88609 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.75□□□□□ -0.21
Lmx1bO88609 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lmx1bO88609 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Lmx1bO88609 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Lmx1bO88609 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.75□□□□□ -0.21
Lmx1bO88609 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.75□□□□□ -0.21
Lmx1bO88609 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.75□□□□□ -0.21
Lmx1bO88609 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lmx1bO88609 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lmx1bO88609 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lmx1bO88609 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lmx1bO88609 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lmx1bO88609 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lmx1bO88609 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Lmx1bO88609 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lmx1bO88609 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lmx1bO88609 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
Lmx1bO88609 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Lmx1bO88609 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.75□□□□□ -0.21
Lmx1bO88609 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Lmx1bO88609 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.74□□□□□ -0.21
Lmx1bO88609 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Lmx1bO88609 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lmx1bO88609 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lmx1bO88609 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lmx1bO88609 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lmx1bO88609 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Lmx1bO88609 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lmx1bO88609 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lmx1bO88609 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.74□□□□□ -0.21
Lmx1bO88609 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Lmx1bO88609 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Lmx1bO88609 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
Lmx1bO88609 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.74□□□□□ -0.21
Lmx1bO88609 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.74□□□□□ -0.21
Lmx1bO88609 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lmx1bO88609 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.74□□□□□ -0.21
Lmx1bO88609 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Lmx1bO88609 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Lmx1bO88609 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.74□□□□□ -0.21
Lmx1bO88609 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lmx1bO88609 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lmx1bO88609 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lmx1bO88609 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lmx1bO88609 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lmx1bO88609 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lmx1bO88609 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lmx1bO88609 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.74□□□□□ -0.21
Lmx1bO88609 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lmx1bO88609 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.74□□□□□ -0.21
Lmx1bO88609 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lmx1bO88609 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lmx1bO88609 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lmx1bO88609 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lmx1bO88609 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lmx1bO88609 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Lmx1bO88609 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Lmx1bO88609 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lmx1bO88609 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Lmx1bO88609 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms