Protein–RNA interactions for Protein: O88351

Ikbkb, Inhibitor of nuclear factor kappa-B kinase subunit beta, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IkbkbO88351 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.79■□□□□ 0.28
IkbkbO88351 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
IkbkbO88351 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
IkbkbO88351 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
IkbkbO88351 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
IkbkbO88351 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IkbkbO88351 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
IkbkbO88351 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
IkbkbO88351 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
IkbkbO88351 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
IkbkbO88351 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IkbkbO88351 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IkbkbO88351 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
IkbkbO88351 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.78■□□□□ 0.28
IkbkbO88351 Gm14140-201ENSMUST00000119999 995 ntBASIC16.78■□□□□ 0.28
IkbkbO88351 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.78■□□□□ 0.28
IkbkbO88351 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IkbkbO88351 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.78■□□□□ 0.28
IkbkbO88351 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.78■□□□□ 0.28
IkbkbO88351 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.78■□□□□ 0.28
IkbkbO88351 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IkbkbO88351 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IkbkbO88351 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IkbkbO88351 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.78■□□□□ 0.28
IkbkbO88351 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IkbkbO88351 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
IkbkbO88351 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
IkbkbO88351 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.78■□□□□ 0.28
IkbkbO88351 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
IkbkbO88351 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IkbkbO88351 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
IkbkbO88351 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.78■□□□□ 0.28
IkbkbO88351 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
IkbkbO88351 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IkbkbO88351 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IkbkbO88351 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
IkbkbO88351 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
IkbkbO88351 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
IkbkbO88351 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
IkbkbO88351 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
IkbkbO88351 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
IkbkbO88351 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
IkbkbO88351 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
IkbkbO88351 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
IkbkbO88351 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
IkbkbO88351 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
IkbkbO88351 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.77■□□□□ 0.28
IkbkbO88351 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
IkbkbO88351 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
IkbkbO88351 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.77■□□□□ 0.28
IkbkbO88351 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.77■□□□□ 0.28
IkbkbO88351 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
IkbkbO88351 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
IkbkbO88351 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
IkbkbO88351 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
IkbkbO88351 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
IkbkbO88351 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
IkbkbO88351 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
IkbkbO88351 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
IkbkbO88351 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
IkbkbO88351 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
IkbkbO88351 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.77■□□□□ 0.27
IkbkbO88351 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
IkbkbO88351 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
IkbkbO88351 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
IkbkbO88351 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
IkbkbO88351 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
IkbkbO88351 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
IkbkbO88351 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
IkbkbO88351 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IkbkbO88351 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IkbkbO88351 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IkbkbO88351 Gm11779-201ENSMUST00000118541 368 ntBASIC16.76■□□□□ 0.27
IkbkbO88351 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IkbkbO88351 Gm8000-201ENSMUST00000188378 592 ntBASIC16.76■□□□□ 0.27
IkbkbO88351 Gm37153-201ENSMUST00000193637 231 ntBASIC16.76■□□□□ 0.27
IkbkbO88351 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.76■□□□□ 0.27
IkbkbO88351 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IkbkbO88351 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IkbkbO88351 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IkbkbO88351 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.76■□□□□ 0.27
IkbkbO88351 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IkbkbO88351 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.76■□□□□ 0.27
IkbkbO88351 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IkbkbO88351 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.75■□□□□ 0.27
IkbkbO88351 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IkbkbO88351 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IkbkbO88351 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IkbkbO88351 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
IkbkbO88351 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IkbkbO88351 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
IkbkbO88351 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IkbkbO88351 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IkbkbO88351 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.75■□□□□ 0.27
IkbkbO88351 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.75■□□□□ 0.27
IkbkbO88351 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IkbkbO88351 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.75■□□□□ 0.27
IkbkbO88351 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IkbkbO88351 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
IkbkbO88351 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms