Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Mir7071-201ENSMUST00000184847 69 ntBASIC18.06■□□□□ 0.48
Smarce1O54941 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Smarce1O54941 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smarce1O54941 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Smarce1O54941 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smarce1O54941 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smarce1O54941 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
Smarce1O54941 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smarce1O54941 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Smarce1O54941 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Smarce1O54941 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smarce1O54941 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smarce1O54941 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smarce1O54941 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smarce1O54941 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smarce1O54941 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smarce1O54941 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
Smarce1O54941 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Smarce1O54941 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smarce1O54941 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC18.05■□□□□ 0.48
Smarce1O54941 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smarce1O54941 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC18.05■□□□□ 0.48
Smarce1O54941 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smarce1O54941 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smarce1O54941 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smarce1O54941 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Smarce1O54941 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smarce1O54941 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smarce1O54941 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smarce1O54941 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smarce1O54941 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smarce1O54941 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smarce1O54941 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smarce1O54941 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smarce1O54941 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smarce1O54941 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smarce1O54941 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smarce1O54941 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smarce1O54941 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smarce1O54941 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smarce1O54941 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smarce1O54941 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC18.04■□□□□ 0.48
Smarce1O54941 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Smarce1O54941 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC18.04■□□□□ 0.48
Smarce1O54941 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smarce1O54941 Gm38318-201ENSMUST00000195769 1706 ntBASIC18.04■□□□□ 0.48
Smarce1O54941 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smarce1O54941 AC157650.3-201ENSMUST00000225058 1476 ntBASIC18.04■□□□□ 0.48
Smarce1O54941 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smarce1O54941 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Smarce1O54941 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Smarce1O54941 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smarce1O54941 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smarce1O54941 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smarce1O54941 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smarce1O54941 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Smarce1O54941 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smarce1O54941 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smarce1O54941 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smarce1O54941 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Smarce1O54941 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smarce1O54941 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smarce1O54941 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smarce1O54941 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC18.03■□□□□ 0.48
Smarce1O54941 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Smarce1O54941 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Smarce1O54941 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC18.03■□□□□ 0.48
Smarce1O54941 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smarce1O54941 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smarce1O54941 Gm7284-201ENSMUST00000131667 944 ntBASIC18.03■□□□□ 0.48
Smarce1O54941 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Smarce1O54941 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Smarce1O54941 AC122024.2-201ENSMUST00000220086 871 ntBASIC18.03■□□□□ 0.48
Smarce1O54941 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.03■□□□□ 0.48
Smarce1O54941 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smarce1O54941 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Smarce1O54941 Gm14026-201ENSMUST00000120625 1789 ntBASIC18.03■□□□□ 0.48
Smarce1O54941 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smarce1O54941 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Smarce1O54941 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smarce1O54941 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Smarce1O54941 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC18.03■□□□□ 0.48
Smarce1O54941 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC18.03■□□□□ 0.48
Smarce1O54941 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smarce1O54941 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Smarce1O54941 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smarce1O54941 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smarce1O54941 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC18.03■□□□□ 0.48
Smarce1O54941 Grk6-207ENSMUST00000225925 2769 ntBASIC18.02■□□□□ 0.48
Smarce1O54941 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smarce1O54941 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smarce1O54941 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smarce1O54941 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
Smarce1O54941 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smarce1O54941 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smarce1O54941 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smarce1O54941 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC18.02■□□□□ 0.48
Smarce1O54941 Gm8097-201ENSMUST00000117903 829 ntBASIC18.02■□□□□ 0.48
Smarce1O54941 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Smarce1O54941 Celf4-206ENSMUST00000224553 1729 ntBASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms