Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clk3O35492 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clk3O35492 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clk3O35492 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.47□□□□□ -0.09
Clk3O35492 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clk3O35492 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clk3O35492 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clk3O35492 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clk3O35492 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clk3O35492 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Clk3O35492 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Clk3O35492 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clk3O35492 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clk3O35492 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.47□□□□□ -0.09
Clk3O35492 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clk3O35492 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clk3O35492 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.47□□□□□ -0.09
Clk3O35492 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Clk3O35492 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.47□□□□□ -0.09
Clk3O35492 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.47□□□□□ -0.09
Clk3O35492 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.47□□□□□ -0.09
Clk3O35492 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.47□□□□□ -0.09
Clk3O35492 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clk3O35492 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.47□□□□□ -0.09
Clk3O35492 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Clk3O35492 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.47□□□□□ -0.09
Clk3O35492 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.47□□□□□ -0.09
Clk3O35492 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.47□□□□□ -0.09
Clk3O35492 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.47□□□□□ -0.09
Clk3O35492 Gm8825-201ENSMUST00000182565 998 ntBASIC14.47□□□□□ -0.09
Clk3O35492 Gm4518-201ENSMUST00000182638 718 ntBASIC14.47□□□□□ -0.09
Clk3O35492 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.47□□□□□ -0.09
Clk3O35492 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.47□□□□□ -0.09
Clk3O35492 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.47□□□□□ -0.09
Clk3O35492 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.47□□□□□ -0.09
Clk3O35492 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Clk3O35492 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clk3O35492 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clk3O35492 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.47□□□□□ -0.09
Clk3O35492 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.47□□□□□ -0.09
Clk3O35492 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.47□□□□□ -0.09
Clk3O35492 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clk3O35492 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clk3O35492 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Clk3O35492 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Clk3O35492 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clk3O35492 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clk3O35492 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clk3O35492 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clk3O35492 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clk3O35492 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clk3O35492 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Clk3O35492 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clk3O35492 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clk3O35492 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clk3O35492 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clk3O35492 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clk3O35492 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clk3O35492 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Clk3O35492 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Clk3O35492 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clk3O35492 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clk3O35492 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Clk3O35492 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clk3O35492 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clk3O35492 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clk3O35492 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clk3O35492 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Clk3O35492 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clk3O35492 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clk3O35492 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clk3O35492 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.46□□□□□ -0.09
Clk3O35492 Gm12497-201ENSMUST00000138778 237 ntBASIC14.46□□□□□ -0.09
Clk3O35492 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Clk3O35492 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clk3O35492 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Clk3O35492 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clk3O35492 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clk3O35492 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Clk3O35492 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Clk3O35492 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Clk3O35492 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
Clk3O35492 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Clk3O35492 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.1
Clk3O35492 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Clk3O35492 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Clk3O35492 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Clk3O35492 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Clk3O35492 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clk3O35492 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clk3O35492 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Clk3O35492 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clk3O35492 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.45□□□□□ -0.1
Clk3O35492 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clk3O35492 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.45□□□□□ -0.1
Clk3O35492 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clk3O35492 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Clk3O35492 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clk3O35492 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clk3O35492 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms