Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Alx4O35137 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Alx4O35137 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx4O35137 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Alx4O35137 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx4O35137 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.54□□□□□ -0.24
Alx4O35137 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx4O35137 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx4O35137 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.54□□□□□ -0.24
Alx4O35137 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.54□□□□□ -0.24
Alx4O35137 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx4O35137 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Alx4O35137 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Alx4O35137 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Alx4O35137 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx4O35137 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.54□□□□□ -0.24
Alx4O35137 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Alx4O35137 Gm8318-201ENSMUST00000182954 872 ntBASIC13.54□□□□□ -0.24
Alx4O35137 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC13.54□□□□□ -0.24
Alx4O35137 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.54□□□□□ -0.24
Alx4O35137 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx4O35137 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx4O35137 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx4O35137 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.54□□□□□ -0.24
Alx4O35137 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Alx4O35137 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx4O35137 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx4O35137 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx4O35137 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Alx4O35137 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx4O35137 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx4O35137 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx4O35137 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx4O35137 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.54□□□□□ -0.24
Alx4O35137 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Alx4O35137 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx4O35137 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Alx4O35137 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Alx4O35137 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx4O35137 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Alx4O35137 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Alx4O35137 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Alx4O35137 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Alx4O35137 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Alx4O35137 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Alx4O35137 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Alx4O35137 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Alx4O35137 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Alx4O35137 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Alx4O35137 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Alx4O35137 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Alx4O35137 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Alx4O35137 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Alx4O35137 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Alx4O35137 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Alx4O35137 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Alx4O35137 Gm15358-201ENSMUST00000119249 520 ntBASIC13.53□□□□□ -0.24
Alx4O35137 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.53□□□□□ -0.24
Alx4O35137 Gm12497-201ENSMUST00000138778 237 ntBASIC13.53□□□□□ -0.24
Alx4O35137 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Alx4O35137 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.53□□□□□ -0.24
Alx4O35137 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.53□□□□□ -0.24
Alx4O35137 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Alx4O35137 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Alx4O35137 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Alx4O35137 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Alx4O35137 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Alx4O35137 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Alx4O35137 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Alx4O35137 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Alx4O35137 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Alx4O35137 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Alx4O35137 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Alx4O35137 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Alx4O35137 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Alx4O35137 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Alx4O35137 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Alx4O35137 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Alx4O35137 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Alx4O35137 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Alx4O35137 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Alx4O35137 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Alx4O35137 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Alx4O35137 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Alx4O35137 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Alx4O35137 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Alx4O35137 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Alx4O35137 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Alx4O35137 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Alx4O35137 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.52□□□□□ -0.25
Alx4O35137 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Alx4O35137 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Alx4O35137 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Alx4O35137 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Alx4O35137 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Alx4O35137 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.52□□□□□ -0.25
Alx4O35137 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Alx4O35137 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Alx4O35137 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Alx4O35137 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms