Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hdac1O09106 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Hdac1O09106 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hdac1O09106 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hdac1O09106 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
Hdac1O09106 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hdac1O09106 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC18.08■□□□□ 0.48
Hdac1O09106 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Hdac1O09106 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hdac1O09106 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.08■□□□□ 0.48
Hdac1O09106 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.08■□□□□ 0.48
Hdac1O09106 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Hdac1O09106 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hdac1O09106 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hdac1O09106 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hdac1O09106 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hdac1O09106 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Hdac1O09106 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hdac1O09106 Gm21009-201ENSMUST00000197169 1669 ntBASIC18.08■□□□□ 0.48
Hdac1O09106 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
Hdac1O09106 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hdac1O09106 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Hdac1O09106 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac1O09106 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac1O09106 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac1O09106 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac1O09106 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac1O09106 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac1O09106 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac1O09106 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Hdac1O09106 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac1O09106 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC18.07■□□□□ 0.48
Hdac1O09106 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC18.07■□□□□ 0.48
Hdac1O09106 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac1O09106 AC153889.1-201ENSMUST00000219257 330 ntBASIC18.07■□□□□ 0.48
Hdac1O09106 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Hdac1O09106 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC18.07■□□□□ 0.48
Hdac1O09106 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac1O09106 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac1O09106 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac1O09106 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac1O09106 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC18.07■□□□□ 0.48
Hdac1O09106 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Hdac1O09106 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Hdac1O09106 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac1O09106 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC18.06■□□□□ 0.48
Hdac1O09106 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac1O09106 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac1O09106 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac1O09106 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Hdac1O09106 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac1O09106 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac1O09106 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac1O09106 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac1O09106 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC18.06■□□□□ 0.48
Hdac1O09106 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac1O09106 Mxra8os-201ENSMUST00000097740 687 ntBASIC18.06■□□□□ 0.48
Hdac1O09106 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.06■□□□□ 0.48
Hdac1O09106 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac1O09106 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac1O09106 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac1O09106 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Hdac1O09106 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac1O09106 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac1O09106 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac1O09106 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Hdac1O09106 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC18.05■□□□□ 0.48
Hdac1O09106 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Hdac1O09106 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hdac1O09106 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Hdac1O09106 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hdac1O09106 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hdac1O09106 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hdac1O09106 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hdac1O09106 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hdac1O09106 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hdac1O09106 Gm8097-201ENSMUST00000117903 829 ntBASIC18.05■□□□□ 0.48
Hdac1O09106 AC124569.2-201ENSMUST00000225998 818 ntBASIC18.05■□□□□ 0.48
Hdac1O09106 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hdac1O09106 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hdac1O09106 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hdac1O09106 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC18.05■□□□□ 0.48
Hdac1O09106 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hdac1O09106 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hdac1O09106 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Hdac1O09106 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hdac1O09106 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hdac1O09106 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Hdac1O09106 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Hdac1O09106 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hdac1O09106 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hdac1O09106 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hdac1O09106 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hdac1O09106 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hdac1O09106 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Hdac1O09106 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Hdac1O09106 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hdac1O09106 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hdac1O09106 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hdac1O09106 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms