Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ube3aO08759 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ube3aO08759 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ube3aO08759 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Ube3aO08759 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ube3aO08759 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ube3aO08759 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ube3aO08759 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ube3aO08759 AC148324.1-201ENSMUST00000219034 4240 ntBASIC16.43■□□□□ 0.22
Ube3aO08759 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ube3aO08759 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ube3aO08759 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ube3aO08759 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ube3aO08759 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ube3aO08759 Gm13312-201ENSMUST00000119631 718 ntBASIC16.43■□□□□ 0.22
Ube3aO08759 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ube3aO08759 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.43■□□□□ 0.22
Ube3aO08759 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ube3aO08759 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ube3aO08759 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ube3aO08759 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.43■□□□□ 0.22
Ube3aO08759 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ube3aO08759 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ube3aO08759 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Ube3aO08759 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ube3aO08759 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Ube3aO08759 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ube3aO08759 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ube3aO08759 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Ube3aO08759 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC16.42■□□□□ 0.22
Ube3aO08759 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.42■□□□□ 0.22
Ube3aO08759 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ube3aO08759 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ube3aO08759 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ube3aO08759 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Ube3aO08759 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.42■□□□□ 0.22
Ube3aO08759 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.42■□□□□ 0.22
Ube3aO08759 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ube3aO08759 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ube3aO08759 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Ube3aO08759 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ube3aO08759 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ube3aO08759 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.42■□□□□ 0.22
Ube3aO08759 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ube3aO08759 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Ube3aO08759 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Ube3aO08759 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Ube3aO08759 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ube3aO08759 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ube3aO08759 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ube3aO08759 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ube3aO08759 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ube3aO08759 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ube3aO08759 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Ube3aO08759 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ube3aO08759 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Ube3aO08759 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Ube3aO08759 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Ube3aO08759 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ube3aO08759 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ube3aO08759 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ube3aO08759 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Ube3aO08759 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Ube3aO08759 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.41■□□□□ 0.22
Ube3aO08759 Gm7284-201ENSMUST00000131667 944 ntBASIC16.41■□□□□ 0.22
Ube3aO08759 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.41■□□□□ 0.22
Ube3aO08759 Gm29518-201ENSMUST00000190858 372 ntBASIC16.41■□□□□ 0.22
Ube3aO08759 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.41■□□□□ 0.22
Ube3aO08759 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Ube3aO08759 Gm9172-201ENSMUST00000212092 954 ntBASIC16.41■□□□□ 0.22
Ube3aO08759 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Ube3aO08759 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ube3aO08759 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ube3aO08759 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ube3aO08759 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.41■□□□□ 0.22
Ube3aO08759 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Ube3aO08759 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ube3aO08759 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ube3aO08759 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ube3aO08759 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ube3aO08759 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ube3aO08759 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ube3aO08759 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ube3aO08759 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ube3aO08759 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ube3aO08759 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ube3aO08759 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.41■□□□□ 0.22
Ube3aO08759 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ube3aO08759 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ube3aO08759 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Ube3aO08759 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Ube3aO08759 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ube3aO08759 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ube3aO08759 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ube3aO08759 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ube3aO08759 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ube3aO08759 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Ube3aO08759 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ube3aO08759 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ube3aO08759 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms