Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.43■□□□□ 0.06
Tnfrsf11bO08712 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Tnfrsf11bO08712 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tnfrsf11bO08712 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
Tnfrsf11bO08712 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
Tnfrsf11bO08712 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Tnfrsf11bO08712 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tnfrsf11bO08712 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf11bO08712 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Tnfrsf11bO08712 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf11bO08712 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf11bO08712 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Tnfrsf11bO08712 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf11bO08712 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf11bO08712 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf11bO08712 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf11bO08712 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf11bO08712 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Tnfrsf11bO08712 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf11bO08712 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.42■□□□□ 0.06
Tnfrsf11bO08712 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Tnfrsf11bO08712 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
Tnfrsf11bO08712 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf11bO08712 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf11bO08712 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.42■□□□□ 0.06
Tnfrsf11bO08712 Ank2-226ENSMUST00000189368 339 ntBASIC15.42■□□□□ 0.06
Tnfrsf11bO08712 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf11bO08712 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf11bO08712 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Tnfrsf11bO08712 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Tnfrsf11bO08712 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf11bO08712 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf11bO08712 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.42■□□□□ 0.06
Tnfrsf11bO08712 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Tnfrsf11bO08712 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Tnfrsf11bO08712 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf11bO08712 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Tnfrsf11bO08712 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf11bO08712 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf11bO08712 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf11bO08712 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Tnfrsf11bO08712 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf11bO08712 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Tnfrsf11bO08712 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.41■□□□□ 0.06
Tnfrsf11bO08712 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf11bO08712 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf11bO08712 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf11bO08712 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.41■□□□□ 0.06
Tnfrsf11bO08712 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf11bO08712 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.41■□□□□ 0.06
Tnfrsf11bO08712 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf11bO08712 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf11bO08712 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Tnfrsf11bO08712 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
Tnfrsf11bO08712 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.41■□□□□ 0.06
Tnfrsf11bO08712 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.41■□□□□ 0.06
Tnfrsf11bO08712 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf11bO08712 Gm4535-201ENSMUST00000182274 558 ntBASIC15.41■□□□□ 0.06
Tnfrsf11bO08712 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf11bO08712 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.41■□□□□ 0.06
Tnfrsf11bO08712 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
Tnfrsf11bO08712 Gm10355-201ENSMUST00000097146 517 ntBASIC15.41■□□□□ 0.06
Tnfrsf11bO08712 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf11bO08712 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf11bO08712 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf11bO08712 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf11bO08712 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
Tnfrsf11bO08712 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf11bO08712 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Tnfrsf11bO08712 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tnfrsf11bO08712 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnfrsf11bO08712 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnfrsf11bO08712 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.4■□□□□ 0.06
Tnfrsf11bO08712 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnfrsf11bO08712 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Tnfrsf11bO08712 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.4■□□□□ 0.06
Tnfrsf11bO08712 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.4■□□□□ 0.06
Tnfrsf11bO08712 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnfrsf11bO08712 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.4■□□□□ 0.06
Tnfrsf11bO08712 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.4■□□□□ 0.06
Tnfrsf11bO08712 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnfrsf11bO08712 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.4■□□□□ 0.06
Tnfrsf11bO08712 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnfrsf11bO08712 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnfrsf11bO08712 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Tnfrsf11bO08712 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnfrsf11bO08712 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnfrsf11bO08712 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.4■□□□□ 0.06
Tnfrsf11bO08712 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tnfrsf11bO08712 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Tnfrsf11bO08712 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Tnfrsf11bO08712 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnfrsf11bO08712 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Tnfrsf11bO08712 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnfrsf11bO08712 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnfrsf11bO08712 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnfrsf11bO08712 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnfrsf11bO08712 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Tnfrsf11bO08712 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tnfrsf11bO08712 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms