Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
B020004C17RikJ3QP07 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
B020004C17RikJ3QP07 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
B020004C17RikJ3QP07 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
B020004C17RikJ3QP07 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
B020004C17RikJ3QP07 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
B020004C17RikJ3QP07 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
B020004C17RikJ3QP07 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
B020004C17RikJ3QP07 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC16.85■□□□□ 0.29
B020004C17RikJ3QP07 Gm6944-201ENSMUST00000182449 1006 ntBASIC16.85■□□□□ 0.29
B020004C17RikJ3QP07 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
B020004C17RikJ3QP07 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
B020004C17RikJ3QP07 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
B020004C17RikJ3QP07 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.85■□□□□ 0.29
B020004C17RikJ3QP07 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
B020004C17RikJ3QP07 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
B020004C17RikJ3QP07 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
B020004C17RikJ3QP07 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
B020004C17RikJ3QP07 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
B020004C17RikJ3QP07 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
B020004C17RikJ3QP07 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
B020004C17RikJ3QP07 Asic1-205ENSMUST00000228185 1818 ntBASIC16.84■□□□□ 0.29
B020004C17RikJ3QP07 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
B020004C17RikJ3QP07 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
B020004C17RikJ3QP07 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.84■□□□□ 0.29
B020004C17RikJ3QP07 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
B020004C17RikJ3QP07 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
B020004C17RikJ3QP07 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
B020004C17RikJ3QP07 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
B020004C17RikJ3QP07 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC16.84■□□□□ 0.29
B020004C17RikJ3QP07 Gm12859-201ENSMUST00000117834 427 ntBASIC16.84■□□□□ 0.29
B020004C17RikJ3QP07 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
B020004C17RikJ3QP07 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC16.84■□□□□ 0.29
B020004C17RikJ3QP07 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
B020004C17RikJ3QP07 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
B020004C17RikJ3QP07 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC16.84■□□□□ 0.29
B020004C17RikJ3QP07 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC16.84■□□□□ 0.29
B020004C17RikJ3QP07 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
B020004C17RikJ3QP07 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
B020004C17RikJ3QP07 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
B020004C17RikJ3QP07 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
B020004C17RikJ3QP07 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
B020004C17RikJ3QP07 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
B020004C17RikJ3QP07 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
B020004C17RikJ3QP07 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
B020004C17RikJ3QP07 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
B020004C17RikJ3QP07 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.29
B020004C17RikJ3QP07 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
B020004C17RikJ3QP07 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
B020004C17RikJ3QP07 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
B020004C17RikJ3QP07 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.83■□□□□ 0.28
B020004C17RikJ3QP07 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
B020004C17RikJ3QP07 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.83■□□□□ 0.28
B020004C17RikJ3QP07 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
B020004C17RikJ3QP07 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
B020004C17RikJ3QP07 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
B020004C17RikJ3QP07 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
B020004C17RikJ3QP07 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
B020004C17RikJ3QP07 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
B020004C17RikJ3QP07 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
B020004C17RikJ3QP07 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
B020004C17RikJ3QP07 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
B020004C17RikJ3QP07 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
B020004C17RikJ3QP07 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
B020004C17RikJ3QP07 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
B020004C17RikJ3QP07 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC16.82■□□□□ 0.28
B020004C17RikJ3QP07 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
B020004C17RikJ3QP07 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
B020004C17RikJ3QP07 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
B020004C17RikJ3QP07 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
B020004C17RikJ3QP07 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
B020004C17RikJ3QP07 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC16.82■□□□□ 0.28
B020004C17RikJ3QP07 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
B020004C17RikJ3QP07 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.82■□□□□ 0.28
B020004C17RikJ3QP07 AL593843.1-201ENSMUST00000195891 145 ntBASIC16.82■□□□□ 0.28
B020004C17RikJ3QP07 Gm16476-201ENSMUST00000221544 139 ntBASIC16.82■□□□□ 0.28
B020004C17RikJ3QP07 AC154239.3-201ENSMUST00000226933 674 ntBASIC16.82■□□□□ 0.28
B020004C17RikJ3QP07 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
B020004C17RikJ3QP07 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
B020004C17RikJ3QP07 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
B020004C17RikJ3QP07 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC16.82■□□□□ 0.28
B020004C17RikJ3QP07 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
B020004C17RikJ3QP07 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
B020004C17RikJ3QP07 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
B020004C17RikJ3QP07 Gm8242-201ENSMUST00000193029 1420 ntBASIC16.81■□□□□ 0.28
B020004C17RikJ3QP07 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
B020004C17RikJ3QP07 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
B020004C17RikJ3QP07 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
B020004C17RikJ3QP07 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
B020004C17RikJ3QP07 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
B020004C17RikJ3QP07 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC16.81■□□□□ 0.28
B020004C17RikJ3QP07 Cd63-ps-201ENSMUST00000145417 875 ntBASIC16.81■□□□□ 0.28
B020004C17RikJ3QP07 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
B020004C17RikJ3QP07 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
B020004C17RikJ3QP07 Gm29310-201ENSMUST00000185468 696 ntBASIC16.81■□□□□ 0.28
B020004C17RikJ3QP07 Gm21825-201ENSMUST00000185728 696 ntBASIC16.81■□□□□ 0.28
B020004C17RikJ3QP07 Gm29109-201ENSMUST00000185895 696 ntBASIC16.81■□□□□ 0.28
B020004C17RikJ3QP07 Gm21896-201ENSMUST00000186520 696 ntBASIC16.81■□□□□ 0.28
B020004C17RikJ3QP07 Gm21873-201ENSMUST00000186728 696 ntBASIC16.81■□□□□ 0.28
B020004C17RikJ3QP07 Gm21794-201ENSMUST00000187056 696 ntBASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms