Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa8J3QNX5 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa8J3QNX5 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa8J3QNX5 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa8J3QNX5 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa8J3QNX5 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Shisa8J3QNX5 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shisa8J3QNX5 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shisa8J3QNX5 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Shisa8J3QNX5 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Shisa8J3QNX5 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Shisa8J3QNX5 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Shisa8J3QNX5 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shisa8J3QNX5 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Shisa8J3QNX5 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shisa8J3QNX5 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shisa8J3QNX5 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shisa8J3QNX5 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Shisa8J3QNX5 Gm15565-201ENSMUST00000118890 427 ntBASIC13.86□□□□□ -0.19
Shisa8J3QNX5 Gm25406-201ENSMUST00000157599 105 ntBASIC13.86□□□□□ -0.19
Shisa8J3QNX5 Gm6623-201ENSMUST00000173570 544 ntBASIC13.86□□□□□ -0.19
Shisa8J3QNX5 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.86□□□□□ -0.19
Shisa8J3QNX5 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC13.86□□□□□ -0.19
Shisa8J3QNX5 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.86□□□□□ -0.19
Shisa8J3QNX5 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.86□□□□□ -0.19
Shisa8J3QNX5 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shisa8J3QNX5 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Shisa8J3QNX5 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shisa8J3QNX5 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shisa8J3QNX5 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shisa8J3QNX5 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Shisa8J3QNX5 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shisa8J3QNX5 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shisa8J3QNX5 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shisa8J3QNX5 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shisa8J3QNX5 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Shisa8J3QNX5 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Shisa8J3QNX5 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shisa8J3QNX5 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Shisa8J3QNX5 Carlr-201ENSMUST00000181515 2574 ntBASIC13.85□□□□□ -0.19
Shisa8J3QNX5 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.85□□□□□ -0.19
Shisa8J3QNX5 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Shisa8J3QNX5 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shisa8J3QNX5 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shisa8J3QNX5 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shisa8J3QNX5 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Shisa8J3QNX5 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shisa8J3QNX5 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shisa8J3QNX5 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shisa8J3QNX5 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC13.85□□□□□ -0.19
Shisa8J3QNX5 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Shisa8J3QNX5 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Shisa8J3QNX5 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Shisa8J3QNX5 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shisa8J3QNX5 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shisa8J3QNX5 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Shisa8J3QNX5 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shisa8J3QNX5 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.85□□□□□ -0.19
Shisa8J3QNX5 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Shisa8J3QNX5 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shisa8J3QNX5 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Shisa8J3QNX5 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shisa8J3QNX5 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.84□□□□□ -0.19
Shisa8J3QNX5 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shisa8J3QNX5 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shisa8J3QNX5 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Shisa8J3QNX5 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shisa8J3QNX5 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Shisa8J3QNX5 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.84□□□□□ -0.19
Shisa8J3QNX5 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Shisa8J3QNX5 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shisa8J3QNX5 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shisa8J3QNX5 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shisa8J3QNX5 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shisa8J3QNX5 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shisa8J3QNX5 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Shisa8J3QNX5 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Shisa8J3QNX5 AC153881.2-201ENSMUST00000214877 204 ntBASIC13.84□□□□□ -0.19
Shisa8J3QNX5 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.84□□□□□ -0.19
Shisa8J3QNX5 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Shisa8J3QNX5 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Shisa8J3QNX5 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shisa8J3QNX5 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shisa8J3QNX5 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shisa8J3QNX5 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shisa8J3QNX5 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shisa8J3QNX5 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shisa8J3QNX5 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.19
Shisa8J3QNX5 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Shisa8J3QNX5 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shisa8J3QNX5 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shisa8J3QNX5 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shisa8J3QNX5 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shisa8J3QNX5 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shisa8J3QNX5 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Shisa8J3QNX5 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC13.83□□□□□ -0.2
Shisa8J3QNX5 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.83□□□□□ -0.2
Shisa8J3QNX5 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC13.83□□□□□ -0.2
Shisa8J3QNX5 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Shisa8J3QNX5 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms