Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
NpcdF8VQB8 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NpcdF8VQB8 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
NpcdF8VQB8 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC18.22■□□□□ 0.51
NpcdF8VQB8 Mir1938-201ENSMUST00000158746 100 ntBASIC18.22■□□□□ 0.51
NpcdF8VQB8 Gm38319-201ENSMUST00000194537 1266 ntBASIC18.22■□□□□ 0.51
NpcdF8VQB8 AL593843.1-201ENSMUST00000195891 145 ntBASIC18.22■□□□□ 0.51
NpcdF8VQB8 Gm44719-201ENSMUST00000206404 149 ntBASIC18.22■□□□□ 0.51
NpcdF8VQB8 Gm7775-201ENSMUST00000218871 853 ntBASIC18.22■□□□□ 0.51
NpcdF8VQB8 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NpcdF8VQB8 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NpcdF8VQB8 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NpcdF8VQB8 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NpcdF8VQB8 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NpcdF8VQB8 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NpcdF8VQB8 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NpcdF8VQB8 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NpcdF8VQB8 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NpcdF8VQB8 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NpcdF8VQB8 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NpcdF8VQB8 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.21■□□□□ 0.51
NpcdF8VQB8 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NpcdF8VQB8 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
NpcdF8VQB8 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC18.21■□□□□ 0.51
NpcdF8VQB8 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
NpcdF8VQB8 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NpcdF8VQB8 Gm8116-201ENSMUST00000182917 1201 ntBASIC18.21■□□□□ 0.51
NpcdF8VQB8 Mir7085-201ENSMUST00000184353 66 ntBASIC18.21■□□□□ 0.51
NpcdF8VQB8 Gm8515-201ENSMUST00000194852 576 ntBASIC18.21■□□□□ 0.51
NpcdF8VQB8 Gm45384-201ENSMUST00000210451 277 ntBASIC18.21■□□□□ 0.51
NpcdF8VQB8 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NpcdF8VQB8 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NpcdF8VQB8 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NpcdF8VQB8 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
NpcdF8VQB8 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NpcdF8VQB8 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NpcdF8VQB8 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NpcdF8VQB8 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NpcdF8VQB8 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NpcdF8VQB8 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NpcdF8VQB8 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NpcdF8VQB8 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NpcdF8VQB8 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.21■□□□□ 0.51
NpcdF8VQB8 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NpcdF8VQB8 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.2■□□□□ 0.5
NpcdF8VQB8 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NpcdF8VQB8 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NpcdF8VQB8 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NpcdF8VQB8 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
NpcdF8VQB8 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NpcdF8VQB8 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NpcdF8VQB8 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC18.2■□□□□ 0.5
NpcdF8VQB8 Gm15321-201ENSMUST00000121290 288 ntBASIC18.2■□□□□ 0.5
NpcdF8VQB8 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC18.2■□□□□ 0.5
NpcdF8VQB8 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
NpcdF8VQB8 Gm24694-201ENSMUST00000180054 110 ntBASIC18.2■□□□□ 0.5
NpcdF8VQB8 Gm27663-201ENSMUST00000184839 110 ntBASIC18.2■□□□□ 0.5
NpcdF8VQB8 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NpcdF8VQB8 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC18.2■□□□□ 0.5
NpcdF8VQB8 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
NpcdF8VQB8 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NpcdF8VQB8 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NpcdF8VQB8 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NpcdF8VQB8 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NpcdF8VQB8 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
NpcdF8VQB8 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.2■□□□□ 0.5
NpcdF8VQB8 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NpcdF8VQB8 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
NpcdF8VQB8 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NpcdF8VQB8 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NpcdF8VQB8 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NpcdF8VQB8 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NpcdF8VQB8 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NpcdF8VQB8 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC18.19■□□□□ 0.5
NpcdF8VQB8 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NpcdF8VQB8 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NpcdF8VQB8 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC18.19■□□□□ 0.5
NpcdF8VQB8 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NpcdF8VQB8 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NpcdF8VQB8 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC18.19■□□□□ 0.5
NpcdF8VQB8 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NpcdF8VQB8 AC153962.4-201ENSMUST00000217878 242 ntBASIC18.19■□□□□ 0.5
NpcdF8VQB8 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NpcdF8VQB8 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NpcdF8VQB8 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NpcdF8VQB8 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NpcdF8VQB8 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
NpcdF8VQB8 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NpcdF8VQB8 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC18.19■□□□□ 0.5
NpcdF8VQB8 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NpcdF8VQB8 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
NpcdF8VQB8 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NpcdF8VQB8 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NpcdF8VQB8 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NpcdF8VQB8 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NpcdF8VQB8 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NpcdF8VQB8 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.18■□□□□ 0.5
NpcdF8VQB8 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC18.18■□□□□ 0.5
NpcdF8VQB8 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.18■□□□□ 0.5
NpcdF8VQB8 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms