Protein–RNA interactions for Protein: E9PUB3

Gm5878, Predicted gene 5878, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5878E9PUB3 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm5878E9PUB3 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm5878E9PUB3 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC11.44□□□□□ -0.58
Gm5878E9PUB3 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm5878E9PUB3 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm5878E9PUB3 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm5878E9PUB3 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Gm5878E9PUB3 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm5878E9PUB3 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm5878E9PUB3 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm5878E9PUB3 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Gm5878E9PUB3 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Gm5878E9PUB3 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm5878E9PUB3 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm5878E9PUB3 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm5878E9PUB3 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm5878E9PUB3 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm5878E9PUB3 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm5878E9PUB3 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm5878E9PUB3 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Gm5878E9PUB3 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm5878E9PUB3 Gm14780-201ENSMUST00000118387 2737 ntBASIC11.43□□□□□ -0.58
Gm5878E9PUB3 Fbxl12-205ENSMUST00000140702 1555 ntBASIC11.43□□□□□ -0.58
Gm5878E9PUB3 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Gm5878E9PUB3 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm5878E9PUB3 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Gm5878E9PUB3 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC11.43□□□□□ -0.58
Gm5878E9PUB3 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Gm5878E9PUB3 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm5878E9PUB3 Gm13830-205ENSMUST00000201195 1155 ntBASIC11.43□□□□□ -0.58
Gm5878E9PUB3 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm5878E9PUB3 Thoc7-209ENSMUST00000225325 765 ntBASIC11.43□□□□□ -0.58
Gm5878E9PUB3 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC11.43□□□□□ -0.58
Gm5878E9PUB3 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm5878E9PUB3 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm5878E9PUB3 Mxra8os-201ENSMUST00000097740 687 ntBASIC11.43□□□□□ -0.58
Gm5878E9PUB3 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm5878E9PUB3 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm5878E9PUB3 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Gm5878E9PUB3 Gm44443-201ENSMUST00000204396 5633 ntBASIC11.43□□□□□ -0.58
Gm5878E9PUB3 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Gm5878E9PUB3 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm5878E9PUB3 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm5878E9PUB3 Efs-202ENSMUST00000227037 2540 ntBASIC11.43□□□□□ -0.58
Gm5878E9PUB3 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC11.43□□□□□ -0.58
Gm5878E9PUB3 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Gm5878E9PUB3 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Gm5878E9PUB3 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm5878E9PUB3 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm5878E9PUB3 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm5878E9PUB3 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm5878E9PUB3 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm5878E9PUB3 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm5878E9PUB3 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC11.42□□□□□ -0.58
Gm5878E9PUB3 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gm5878E9PUB3 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Gm5878E9PUB3 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm5878E9PUB3 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm5878E9PUB3 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm5878E9PUB3 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm5878E9PUB3 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm5878E9PUB3 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Gm5878E9PUB3 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm5878E9PUB3 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm5878E9PUB3 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm5878E9PUB3 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm5878E9PUB3 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Gm5878E9PUB3 Gm7284-201ENSMUST00000131667 944 ntBASIC11.42□□□□□ -0.58
Gm5878E9PUB3 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm5878E9PUB3 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Gm5878E9PUB3 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Gm5878E9PUB3 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC11.42□□□□□ -0.58
Gm5878E9PUB3 Gm16425-201ENSMUST00000118143 3130 ntBASIC11.42□□□□□ -0.58
Gm5878E9PUB3 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Gm5878E9PUB3 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm5878E9PUB3 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm5878E9PUB3 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm5878E9PUB3 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm5878E9PUB3 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm5878E9PUB3 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm5878E9PUB3 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm5878E9PUB3 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Gm5878E9PUB3 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm5878E9PUB3 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm5878E9PUB3 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm5878E9PUB3 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Gm5878E9PUB3 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm5878E9PUB3 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Gm5878E9PUB3 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm5878E9PUB3 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm5878E9PUB3 Gm12620-201ENSMUST00000119791 1986 ntBASIC11.41□□□□□ -0.58
Gm5878E9PUB3 Gm12612-201ENSMUST00000140182 1986 ntBASIC11.41□□□□□ -0.58
Gm5878E9PUB3 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm5878E9PUB3 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm5878E9PUB3 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm5878E9PUB3 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm5878E9PUB3 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC11.41□□□□□ -0.58
Gm5878E9PUB3 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Gm5878E9PUB3 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.41□□□□□ -0.58
Gm5878E9PUB3 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms