Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.52■□□□□ 0.4
Clrn2B2RVW2 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clrn2B2RVW2 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clrn2B2RVW2 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
Clrn2B2RVW2 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Clrn2B2RVW2 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Clrn2B2RVW2 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Clrn2B2RVW2 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clrn2B2RVW2 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clrn2B2RVW2 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.51■□□□□ 0.39
Clrn2B2RVW2 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Clrn2B2RVW2 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Clrn2B2RVW2 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clrn2B2RVW2 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clrn2B2RVW2 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Clrn2B2RVW2 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Clrn2B2RVW2 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC17.51■□□□□ 0.39
Clrn2B2RVW2 Gm18049-201ENSMUST00000208909 581 ntBASIC17.51■□□□□ 0.39
Clrn2B2RVW2 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC17.51■□□□□ 0.39
Clrn2B2RVW2 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clrn2B2RVW2 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clrn2B2RVW2 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clrn2B2RVW2 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clrn2B2RVW2 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Clrn2B2RVW2 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clrn2B2RVW2 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Clrn2B2RVW2 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clrn2B2RVW2 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Clrn2B2RVW2 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Clrn2B2RVW2 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Clrn2B2RVW2 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Clrn2B2RVW2 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clrn2B2RVW2 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clrn2B2RVW2 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clrn2B2RVW2 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.5■□□□□ 0.39
Clrn2B2RVW2 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Clrn2B2RVW2 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Clrn2B2RVW2 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clrn2B2RVW2 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clrn2B2RVW2 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Clrn2B2RVW2 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC17.5■□□□□ 0.39
Clrn2B2RVW2 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Clrn2B2RVW2 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC17.5■□□□□ 0.39
Clrn2B2RVW2 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clrn2B2RVW2 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clrn2B2RVW2 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clrn2B2RVW2 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Clrn2B2RVW2 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Clrn2B2RVW2 Ighv8-7-201ENSMUST00000194349 297 ntBASIC17.5■□□□□ 0.39
Clrn2B2RVW2 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC17.5■□□□□ 0.39
Clrn2B2RVW2 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clrn2B2RVW2 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clrn2B2RVW2 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clrn2B2RVW2 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clrn2B2RVW2 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.5■□□□□ 0.39
Clrn2B2RVW2 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clrn2B2RVW2 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Clrn2B2RVW2 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Clrn2B2RVW2 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clrn2B2RVW2 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Clrn2B2RVW2 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Clrn2B2RVW2 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC17.5■□□□□ 0.39
Clrn2B2RVW2 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clrn2B2RVW2 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clrn2B2RVW2 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clrn2B2RVW2 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clrn2B2RVW2 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Clrn2B2RVW2 Gm15593-201ENSMUST00000122085 1008 ntBASIC17.49■□□□□ 0.39
Clrn2B2RVW2 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Clrn2B2RVW2 Gm28630-201ENSMUST00000187806 498 ntBASIC17.49■□□□□ 0.39
Clrn2B2RVW2 Gm18766-201ENSMUST00000189811 808 ntBASIC17.49■□□□□ 0.39
Clrn2B2RVW2 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Clrn2B2RVW2 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Clrn2B2RVW2 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Clrn2B2RVW2 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Clrn2B2RVW2 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Clrn2B2RVW2 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.49■□□□□ 0.39
Clrn2B2RVW2 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Clrn2B2RVW2 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Clrn2B2RVW2 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Clrn2B2RVW2 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.48■□□□□ 0.39
Clrn2B2RVW2 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clrn2B2RVW2 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.48■□□□□ 0.39
Clrn2B2RVW2 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Clrn2B2RVW2 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clrn2B2RVW2 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC17.48■□□□□ 0.39
Clrn2B2RVW2 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Clrn2B2RVW2 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clrn2B2RVW2 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clrn2B2RVW2 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clrn2B2RVW2 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Clrn2B2RVW2 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.48■□□□□ 0.39
Clrn2B2RVW2 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC17.48■□□□□ 0.39
Clrn2B2RVW2 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Clrn2B2RVW2 H2-Pa-201ENSMUST00000182803 626 ntBASIC17.48■□□□□ 0.39
Clrn2B2RVW2 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Clrn2B2RVW2 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC17.48■□□□□ 0.39
Clrn2B2RVW2 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Clrn2B2RVW2 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Clrn2B2RVW2 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms