Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn1aA2APX8 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Scn1aA2APX8 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.84■□□□□ 0.13
Scn1aA2APX8 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Scn1aA2APX8 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Scn1aA2APX8 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.84■□□□□ 0.13
Scn1aA2APX8 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
Scn1aA2APX8 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
Scn1aA2APX8 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn1aA2APX8 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Scn1aA2APX8 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Scn1aA2APX8 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Scn1aA2APX8 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn1aA2APX8 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn1aA2APX8 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn1aA2APX8 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn1aA2APX8 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn1aA2APX8 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.84■□□□□ 0.13
Scn1aA2APX8 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.84■□□□□ 0.13
Scn1aA2APX8 Gm2451-201ENSMUST00000199447 999 ntBASIC15.84■□□□□ 0.13
Scn1aA2APX8 Gm10290-201ENSMUST00000200451 999 ntBASIC15.84■□□□□ 0.13
Scn1aA2APX8 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn1aA2APX8 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Scn1aA2APX8 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Scn1aA2APX8 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Scn1aA2APX8 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Scn1aA2APX8 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Scn1aA2APX8 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Scn1aA2APX8 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.13
Scn1aA2APX8 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Scn1aA2APX8 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scn1aA2APX8 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scn1aA2APX8 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scn1aA2APX8 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Scn1aA2APX8 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Scn1aA2APX8 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Scn1aA2APX8 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Scn1aA2APX8 Gm26308-201ENSMUST00000157768 69 ntBASIC15.83■□□□□ 0.12
Scn1aA2APX8 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.83■□□□□ 0.12
Scn1aA2APX8 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Scn1aA2APX8 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scn1aA2APX8 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scn1aA2APX8 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scn1aA2APX8 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scn1aA2APX8 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Scn1aA2APX8 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scn1aA2APX8 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Scn1aA2APX8 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scn1aA2APX8 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Scn1aA2APX8 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Scn1aA2APX8 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Scn1aA2APX8 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Scn1aA2APX8 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.82■□□□□ 0.12
Scn1aA2APX8 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.82■□□□□ 0.12
Scn1aA2APX8 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn1aA2APX8 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Scn1aA2APX8 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Scn1aA2APX8 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn1aA2APX8 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Scn1aA2APX8 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn1aA2APX8 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn1aA2APX8 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.82■□□□□ 0.12
Scn1aA2APX8 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn1aA2APX8 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn1aA2APX8 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Scn1aA2APX8 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Scn1aA2APX8 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Scn1aA2APX8 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn1aA2APX8 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn1aA2APX8 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Scn1aA2APX8 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Scn1aA2APX8 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn1aA2APX8 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.82■□□□□ 0.12
Scn1aA2APX8 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Scn1aA2APX8 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn1aA2APX8 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn1aA2APX8 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.82■□□□□ 0.12
Scn1aA2APX8 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.81■□□□□ 0.12
Scn1aA2APX8 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn1aA2APX8 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn1aA2APX8 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn1aA2APX8 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn1aA2APX8 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn1aA2APX8 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Scn1aA2APX8 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Scn1aA2APX8 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Scn1aA2APX8 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn1aA2APX8 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn1aA2APX8 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn1aA2APX8 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.81■□□□□ 0.12
Scn1aA2APX8 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.81■□□□□ 0.12
Scn1aA2APX8 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Scn1aA2APX8 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Scn1aA2APX8 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.81■□□□□ 0.12
Scn1aA2APX8 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Scn1aA2APX8 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.81■□□□□ 0.12
Scn1aA2APX8 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn1aA2APX8 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn1aA2APX8 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Scn1aA2APX8 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms