Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.36■□□□□ 0.37
Ccdc112A0AUP1 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc112A0AUP1 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Ccdc112A0AUP1 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Ccdc112A0AUP1 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc112A0AUP1 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc112A0AUP1 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc112A0AUP1 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.36■□□□□ 0.37
Ccdc112A0AUP1 Gm8097-201ENSMUST00000117903 829 ntBASIC17.36■□□□□ 0.37
Ccdc112A0AUP1 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.36■□□□□ 0.37
Ccdc112A0AUP1 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.36■□□□□ 0.37
Ccdc112A0AUP1 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc112A0AUP1 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc112A0AUP1 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Ccdc112A0AUP1 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc112A0AUP1 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC17.36■□□□□ 0.37
Ccdc112A0AUP1 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc112A0AUP1 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc112A0AUP1 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc112A0AUP1 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.36■□□□□ 0.37
Ccdc112A0AUP1 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc112A0AUP1 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc112A0AUP1 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc112A0AUP1 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Ccdc112A0AUP1 Gm45293-201ENSMUST00000209754 1812 ntBASIC17.35■□□□□ 0.37
Ccdc112A0AUP1 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc112A0AUP1 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC17.35■□□□□ 0.37
Ccdc112A0AUP1 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc112A0AUP1 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc112A0AUP1 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc112A0AUP1 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc112A0AUP1 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Ccdc112A0AUP1 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc112A0AUP1 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Ccdc112A0AUP1 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc112A0AUP1 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC17.35■□□□□ 0.37
Ccdc112A0AUP1 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Ccdc112A0AUP1 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc112A0AUP1 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc112A0AUP1 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc112A0AUP1 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Ccdc112A0AUP1 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Ccdc112A0AUP1 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Ccdc112A0AUP1 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc112A0AUP1 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc112A0AUP1 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc112A0AUP1 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc112A0AUP1 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc112A0AUP1 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Ccdc112A0AUP1 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc112A0AUP1 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc112A0AUP1 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc112A0AUP1 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc112A0AUP1 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Ccdc112A0AUP1 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc112A0AUP1 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.34■□□□□ 0.37
Ccdc112A0AUP1 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc112A0AUP1 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Ccdc112A0AUP1 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Ccdc112A0AUP1 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc112A0AUP1 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.34■□□□□ 0.37
Ccdc112A0AUP1 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Ccdc112A0AUP1 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc112A0AUP1 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.34■□□□□ 0.37
Ccdc112A0AUP1 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.34■□□□□ 0.37
Ccdc112A0AUP1 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc112A0AUP1 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.34■□□□□ 0.37
Ccdc112A0AUP1 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc112A0AUP1 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc112A0AUP1 Celf4-206ENSMUST00000224553 1729 ntBASIC17.34■□□□□ 0.37
Ccdc112A0AUP1 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc112A0AUP1 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.34■□□□□ 0.37
Ccdc112A0AUP1 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc112A0AUP1 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc112A0AUP1 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc112A0AUP1 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc112A0AUP1 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Ccdc112A0AUP1 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc112A0AUP1 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc112A0AUP1 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc112A0AUP1 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Ccdc112A0AUP1 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc112A0AUP1 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc112A0AUP1 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Ccdc112A0AUP1 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc112A0AUP1 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc112A0AUP1 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc112A0AUP1 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc112A0AUP1 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc112A0AUP1 AC157650.3-201ENSMUST00000225058 1476 ntBASIC17.33■□□□□ 0.37
Ccdc112A0AUP1 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Ccdc112A0AUP1 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Ccdc112A0AUP1 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc112A0AUP1 CT009510.1-201ENSMUST00000227972 270 ntBASIC17.33■□□□□ 0.36
Ccdc112A0AUP1 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Ccdc112A0AUP1 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc112A0AUP1 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc112A0AUP1 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Ccdc112A0AUP1 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc112A0AUP1 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms