Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav3n-3A0A0G2JEM0 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Rbfox2-206ENSMUST00000227314 1810 ntBASIC11.53□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.52□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC11.52□□□□□ -0.56
Trav3n-3A0A0G2JEM0 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Gm29994-201ENSMUST00000195495 1193 ntBASIC11.52□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC11.52□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Gm7213-201ENSMUST00000215977 950 ntBASIC11.52□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3n-3A0A0G2JEM0 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC11.52□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Nupl1-207ENSMUST00000225311 2475 ntBASIC11.52□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Gm19863-201ENSMUST00000192480 2218 ntBASIC11.52□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3n-3A0A0G2JEM0 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Gm22240-201ENSMUST00000175225 82 ntBASIC11.51□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Gm4217-201ENSMUST00000182243 1002 ntBASIC11.51□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Mir1668-201ENSMUST00000184114 107 ntBASIC11.51□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3n-3A0A0G2JEM0 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Trav3n-3A0A0G2JEM0 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3n-3A0A0G2JEM0 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav3n-3A0A0G2JEM0 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms