Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbc1A0A0A6YWV4 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trbc1A0A0A6YWV4 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trbc1A0A0A6YWV4 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbc1A0A0A6YWV4 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbc1A0A0A6YWV4 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.98□□□□□ -0.17
Trbc1A0A0A6YWV4 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbc1A0A0A6YWV4 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbc1A0A0A6YWV4 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbc1A0A0A6YWV4 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trbc1A0A0A6YWV4 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbc1A0A0A6YWV4 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbc1A0A0A6YWV4 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trbc1A0A0A6YWV4 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Trbc1A0A0A6YWV4 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbc1A0A0A6YWV4 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbc1A0A0A6YWV4 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trbc1A0A0A6YWV4 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbc1A0A0A6YWV4 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbc1A0A0A6YWV4 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trbc1A0A0A6YWV4 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.97□□□□□ -0.17
Trbc1A0A0A6YWV4 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.97□□□□□ -0.17
Trbc1A0A0A6YWV4 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.97□□□□□ -0.17
Trbc1A0A0A6YWV4 Gm6443-201ENSMUST00000203599 874 ntBASIC13.97□□□□□ -0.17
Trbc1A0A0A6YWV4 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trbc1A0A0A6YWV4 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trbc1A0A0A6YWV4 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbc1A0A0A6YWV4 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbc1A0A0A6YWV4 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.97□□□□□ -0.17
Trbc1A0A0A6YWV4 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbc1A0A0A6YWV4 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbc1A0A0A6YWV4 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbc1A0A0A6YWV4 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbc1A0A0A6YWV4 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.97□□□□□ -0.17
Trbc1A0A0A6YWV4 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trbc1A0A0A6YWV4 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.97□□□□□ -0.17
Trbc1A0A0A6YWV4 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Trbc1A0A0A6YWV4 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trbc1A0A0A6YWV4 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.96□□□□□ -0.17
Trbc1A0A0A6YWV4 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbc1A0A0A6YWV4 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trbc1A0A0A6YWV4 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.96□□□□□ -0.17
Trbc1A0A0A6YWV4 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.96□□□□□ -0.17
Trbc1A0A0A6YWV4 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbc1A0A0A6YWV4 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbc1A0A0A6YWV4 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Trbc1A0A0A6YWV4 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbc1A0A0A6YWV4 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.96□□□□□ -0.17
Trbc1A0A0A6YWV4 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trbc1A0A0A6YWV4 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbc1A0A0A6YWV4 Gm1401-201ENSMUST00000122048 772 ntBASIC13.96□□□□□ -0.17
Trbc1A0A0A6YWV4 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.96□□□□□ -0.17
Trbc1A0A0A6YWV4 Gm18489-201ENSMUST00000172565 551 ntBASIC13.96□□□□□ -0.17
Trbc1A0A0A6YWV4 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.96□□□□□ -0.17
Trbc1A0A0A6YWV4 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trbc1A0A0A6YWV4 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.96□□□□□ -0.17
Trbc1A0A0A6YWV4 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbc1A0A0A6YWV4 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbc1A0A0A6YWV4 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbc1A0A0A6YWV4 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.96□□□□□ -0.17
Trbc1A0A0A6YWV4 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.96□□□□□ -0.17
Trbc1A0A0A6YWV4 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbc1A0A0A6YWV4 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbc1A0A0A6YWV4 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trbc1A0A0A6YWV4 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Trbc1A0A0A6YWV4 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbc1A0A0A6YWV4 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trbc1A0A0A6YWV4 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trbc1A0A0A6YWV4 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.96□□□□□ -0.18
Trbc1A0A0A6YWV4 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Trbc1A0A0A6YWV4 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbc1A0A0A6YWV4 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbc1A0A0A6YWV4 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbc1A0A0A6YWV4 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trbc1A0A0A6YWV4 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.95□□□□□ -0.18
Trbc1A0A0A6YWV4 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbc1A0A0A6YWV4 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.95□□□□□ -0.18
Trbc1A0A0A6YWV4 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbc1A0A0A6YWV4 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trbc1A0A0A6YWV4 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbc1A0A0A6YWV4 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbc1A0A0A6YWV4 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trbc1A0A0A6YWV4 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbc1A0A0A6YWV4 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
Trbc1A0A0A6YWV4 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbc1A0A0A6YWV4 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trbc1A0A0A6YWV4 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trbc1A0A0A6YWV4 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trbc1A0A0A6YWV4 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbc1A0A0A6YWV4 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trbc1A0A0A6YWV4 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trbc1A0A0A6YWV4 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbc1A0A0A6YWV4 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.95□□□□□ -0.18
Trbc1A0A0A6YWV4 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbc1A0A0A6YWV4 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trbc1A0A0A6YWV4 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbc1A0A0A6YWV4 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbc1A0A0A6YWV4 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbc1A0A0A6YWV4 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trbc1A0A0A6YWV4 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms