Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC10.48□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Grk6-207ENSMUST00000225925 2769 ntBASIC10.48□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC10.48□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC10.48□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC10.48□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC10.48□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC10.47□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC10.47□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC10.47□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Krtap5-1-202ENSMUST00000188274 742 ntBASIC10.47□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC10.47□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 AC125350.1-201ENSMUST00000225115 903 ntBASIC10.47□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC10.47□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Gm13034-201ENSMUST00000121342 3177 ntBASIC10.47□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC10.47□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Prkcz2-201ENSMUST00000206136 1756 ntBASIC10.47□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC10.47□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC10.46□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC10.46□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC10.46□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC10.46□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav13-4-dv7A0A075B6C2 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms