Protein–RNA interactions for Protein: A0A075B657

Trdv1, T cell receptor delta variable 1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv1A0A075B657 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trdv1A0A075B657 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Trdv1A0A075B657 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC11.58□□□□□ -0.56
Trdv1A0A075B657 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trdv1A0A075B657 Gm7286-201ENSMUST00000182691 1007 ntBASIC11.58□□□□□ -0.56
Trdv1A0A075B657 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC11.58□□□□□ -0.56
Trdv1A0A075B657 Ighv6-1-201ENSMUST00000193612 343 ntBASIC11.58□□□□□ -0.56
Trdv1A0A075B657 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC11.58□□□□□ -0.56
Trdv1A0A075B657 AC159093.1-201ENSMUST00000227779 380 ntBASIC11.58□□□□□ -0.56
Trdv1A0A075B657 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trdv1A0A075B657 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trdv1A0A075B657 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trdv1A0A075B657 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trdv1A0A075B657 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trdv1A0A075B657 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trdv1A0A075B657 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trdv1A0A075B657 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trdv1A0A075B657 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trdv1A0A075B657 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trdv1A0A075B657 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trdv1A0A075B657 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trdv1A0A075B657 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trdv1A0A075B657 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trdv1A0A075B657 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trdv1A0A075B657 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC11.58□□□□□ -0.56
Trdv1A0A075B657 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trdv1A0A075B657 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trdv1A0A075B657 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trdv1A0A075B657 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trdv1A0A075B657 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trdv1A0A075B657 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Trdv1A0A075B657 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trdv1A0A075B657 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trdv1A0A075B657 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Trdv1A0A075B657 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
Trdv1A0A075B657 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trdv1A0A075B657 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trdv1A0A075B657 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trdv1A0A075B657 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trdv1A0A075B657 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Trdv1A0A075B657 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trdv1A0A075B657 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trdv1A0A075B657 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trdv1A0A075B657 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trdv1A0A075B657 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trdv1A0A075B657 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trdv1A0A075B657 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC11.57□□□□□ -0.56
Trdv1A0A075B657 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trdv1A0A075B657 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trdv1A0A075B657 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trdv1A0A075B657 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC11.57□□□□□ -0.56
Trdv1A0A075B657 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC11.57□□□□□ -0.56
Trdv1A0A075B657 AC153881.2-201ENSMUST00000214877 204 ntBASIC11.57□□□□□ -0.56
Trdv1A0A075B657 AC127349.1-201ENSMUST00000224590 266 ntBASIC11.57□□□□□ -0.56
Trdv1A0A075B657 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trdv1A0A075B657 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Trdv1A0A075B657 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trdv1A0A075B657 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trdv1A0A075B657 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trdv1A0A075B657 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC11.57□□□□□ -0.56
Trdv1A0A075B657 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trdv1A0A075B657 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trdv1A0A075B657 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trdv1A0A075B657 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Trdv1A0A075B657 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trdv1A0A075B657 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trdv1A0A075B657 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trdv1A0A075B657 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trdv1A0A075B657 Gm14780-201ENSMUST00000118387 2737 ntBASIC11.57□□□□□ -0.56
Trdv1A0A075B657 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trdv1A0A075B657 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC11.56□□□□□ -0.56
Trdv1A0A075B657 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Trdv1A0A075B657 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trdv1A0A075B657 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trdv1A0A075B657 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trdv1A0A075B657 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC11.56□□□□□ -0.56
Trdv1A0A075B657 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trdv1A0A075B657 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trdv1A0A075B657 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trdv1A0A075B657 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trdv1A0A075B657 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trdv1A0A075B657 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC11.56□□□□□ -0.56
Trdv1A0A075B657 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC11.56□□□□□ -0.56
Trdv1A0A075B657 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trdv1A0A075B657 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trdv1A0A075B657 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trdv1A0A075B657 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trdv1A0A075B657 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trdv1A0A075B657 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trdv1A0A075B657 Gm11950-201ENSMUST00000121615 838 ntBASIC11.56□□□□□ -0.56
Trdv1A0A075B657 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trdv1A0A075B657 Rprl3-201ENSMUST00000157400 290 ntBASIC11.56□□□□□ -0.56
Trdv1A0A075B657 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Trdv1A0A075B657 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trdv1A0A075B657 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trdv1A0A075B657 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trdv1A0A075B657 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trdv1A0A075B657 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trdv1A0A075B657 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trdv1A0A075B657 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms