Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.42□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Gm10013-201ENSMUST00000106074 672 ntBASIC12.42□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.42□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.42□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Grk6-207ENSMUST00000225925 2769 ntBASIC12.41□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav15-2-dv6-2A0A075B650 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms