Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Trav8-1A0A075B641 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav8-1A0A075B641 Gm20049-201ENSMUST00000219950 730 ntBASIC10.93□□□□□ -0.66
Trav8-1A0A075B641 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav8-1A0A075B641 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav8-1A0A075B641 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav8-1A0A075B641 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Trav8-1A0A075B641 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav8-1A0A075B641 Gm12620-201ENSMUST00000119791 1986 ntBASIC10.93□□□□□ -0.66
Trav8-1A0A075B641 Gm12612-201ENSMUST00000140182 1986 ntBASIC10.93□□□□□ -0.66
Trav8-1A0A075B641 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav8-1A0A075B641 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
Trav8-1A0A075B641 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Trav8-1A0A075B641 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav8-1A0A075B641 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav8-1A0A075B641 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav8-1A0A075B641 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Trav8-1A0A075B641 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav8-1A0A075B641 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav8-1A0A075B641 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav8-1A0A075B641 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav8-1A0A075B641 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav8-1A0A075B641 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav8-1A0A075B641 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav8-1A0A075B641 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav8-1A0A075B641 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
Trav8-1A0A075B641 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav8-1A0A075B641 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC10.92□□□□□ -0.66
Trav8-1A0A075B641 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Trav8-1A0A075B641 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav8-1A0A075B641 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav8-1A0A075B641 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC10.92□□□□□ -0.66
Trav8-1A0A075B641 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav8-1A0A075B641 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Trav8-1A0A075B641 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav8-1A0A075B641 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav8-1A0A075B641 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav8-1A0A075B641 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav8-1A0A075B641 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav8-1A0A075B641 Nupl1-207ENSMUST00000225311 2475 ntBASIC10.92□□□□□ -0.66
Trav8-1A0A075B641 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Trav8-1A0A075B641 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav8-1A0A075B641 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav8-1A0A075B641 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav8-1A0A075B641 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC10.92□□□□□ -0.66
Trav8-1A0A075B641 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC10.92□□□□□ -0.66
Trav8-1A0A075B641 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC10.92□□□□□ -0.66
Trav8-1A0A075B641 AC120002.2-201ENSMUST00000220205 773 ntBASIC10.92□□□□□ -0.66
Trav8-1A0A075B641 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav8-1A0A075B641 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav8-1A0A075B641 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav8-1A0A075B641 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav8-1A0A075B641 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav8-1A0A075B641 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav8-1A0A075B641 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav8-1A0A075B641 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav8-1A0A075B641 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
Trav8-1A0A075B641 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Trav8-1A0A075B641 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav8-1A0A075B641 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav8-1A0A075B641 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
Trav8-1A0A075B641 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav8-1A0A075B641 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC10.92□□□□□ -0.66
Trav8-1A0A075B641 Camk2g-217ENSMUST00000226630 1937 ntBASIC10.92□□□□□ -0.66
Trav8-1A0A075B641 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav8-1A0A075B641 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav8-1A0A075B641 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav8-1A0A075B641 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav8-1A0A075B641 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC10.91□□□□□ -0.66
Trav8-1A0A075B641 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav8-1A0A075B641 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav8-1A0A075B641 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav8-1A0A075B641 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav8-1A0A075B641 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav8-1A0A075B641 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC10.91□□□□□ -0.66
Trav8-1A0A075B641 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC10.91□□□□□ -0.66
Trav8-1A0A075B641 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav8-1A0A075B641 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav8-1A0A075B641 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav8-1A0A075B641 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav8-1A0A075B641 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav8-1A0A075B641 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav8-1A0A075B641 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC10.91□□□□□ -0.66
Trav8-1A0A075B641 Gm12085-201ENSMUST00000119263 940 ntBASIC10.91□□□□□ -0.66
Trav8-1A0A075B641 Gm7638-201ENSMUST00000121348 967 ntBASIC10.91□□□□□ -0.66
Trav8-1A0A075B641 Gm15378-201ENSMUST00000121894 207 ntBASIC10.91□□□□□ -0.66
Trav8-1A0A075B641 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav8-1A0A075B641 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav8-1A0A075B641 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav8-1A0A075B641 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav8-1A0A075B641 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav8-1A0A075B641 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav8-1A0A075B641 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav8-1A0A075B641 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav8-1A0A075B641 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav8-1A0A075B641 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav8-1A0A075B641 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Trav8-1A0A075B641 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav8-1A0A075B641 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC10.9□□□□□ -0.66
Trav8-1A0A075B641 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms