Protein–RNA interactions for Protein: A0A075B640

Trav7-6, T cell receptor alpha variable 7-6 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-6A0A075B640 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav7-6A0A075B640 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav7-6A0A075B640 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
Trav7-6A0A075B640 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav7-6A0A075B640 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav7-6A0A075B640 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav7-6A0A075B640 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav7-6A0A075B640 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav7-6A0A075B640 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav7-6A0A075B640 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav7-6A0A075B640 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Trav7-6A0A075B640 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav7-6A0A075B640 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav7-6A0A075B640 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav7-6A0A075B640 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav7-6A0A075B640 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav7-6A0A075B640 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Trav7-6A0A075B640 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav7-6A0A075B640 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav7-6A0A075B640 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Trav7-6A0A075B640 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Trav7-6A0A075B640 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Trav7-6A0A075B640 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Trav7-6A0A075B640 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Trav7-6A0A075B640 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Trav7-6A0A075B640 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC10.69□□□□□ -0.7
Trav7-6A0A075B640 Gm11950-201ENSMUST00000121615 838 ntBASIC10.69□□□□□ -0.7
Trav7-6A0A075B640 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav7-6A0A075B640 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav7-6A0A075B640 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Trav7-6A0A075B640 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav7-6A0A075B640 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Trav7-6A0A075B640 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC10.69□□□□□ -0.7
Trav7-6A0A075B640 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC10.69□□□□□ -0.7
Trav7-6A0A075B640 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav7-6A0A075B640 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav7-6A0A075B640 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav7-6A0A075B640 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav7-6A0A075B640 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav7-6A0A075B640 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Trav7-6A0A075B640 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav7-6A0A075B640 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav7-6A0A075B640 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav7-6A0A075B640 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav7-6A0A075B640 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav7-6A0A075B640 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav7-6A0A075B640 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav7-6A0A075B640 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav7-6A0A075B640 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav7-6A0A075B640 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav7-6A0A075B640 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav7-6A0A075B640 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav7-6A0A075B640 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav7-6A0A075B640 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav7-6A0A075B640 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav7-6A0A075B640 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
Trav7-6A0A075B640 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav7-6A0A075B640 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav7-6A0A075B640 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Trav7-6A0A075B640 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Trav7-6A0A075B640 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Trav7-6A0A075B640 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav7-6A0A075B640 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav7-6A0A075B640 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav7-6A0A075B640 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Trav7-6A0A075B640 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav7-6A0A075B640 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav7-6A0A075B640 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav7-6A0A075B640 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav7-6A0A075B640 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav7-6A0A075B640 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav7-6A0A075B640 Gm10231-201ENSMUST00000181584 441 ntBASIC10.68□□□□□ -0.7
Trav7-6A0A075B640 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC10.68□□□□□ -0.7
Trav7-6A0A075B640 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav7-6A0A075B640 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav7-6A0A075B640 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav7-6A0A075B640 Gm10175-202ENSMUST00000208752 441 ntBASIC10.68□□□□□ -0.7
Trav7-6A0A075B640 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav7-6A0A075B640 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Trav7-6A0A075B640 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav7-6A0A075B640 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav7-6A0A075B640 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav7-6A0A075B640 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Trav7-6A0A075B640 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav7-6A0A075B640 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav7-6A0A075B640 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC10.68□□□□□ -0.7
Trav7-6A0A075B640 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav7-6A0A075B640 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Trav7-6A0A075B640 Gm11960-202ENSMUST00000181063 2858 ntBASIC10.68□□□□□ -0.7
Trav7-6A0A075B640 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Trav7-6A0A075B640 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav7-6A0A075B640 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav7-6A0A075B640 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav7-6A0A075B640 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav7-6A0A075B640 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav7-6A0A075B640 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav7-6A0A075B640 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav7-6A0A075B640 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav7-6A0A075B640 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav7-6A0A075B640 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms