Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC11.19□□□□□ -0.62
Trav16d-dv11A0A075B617 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav16d-dv11A0A075B617 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav16d-dv11A0A075B617 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav16d-dv11A0A075B617 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav16d-dv11A0A075B617 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav16d-dv11A0A075B617 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trav16d-dv11A0A075B617 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav16d-dv11A0A075B617 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.18□□□□□ -0.62
Trav16d-dv11A0A075B617 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.18□□□□□ -0.62
Trav16d-dv11A0A075B617 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trav16d-dv11A0A075B617 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav16d-dv11A0A075B617 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.18□□□□□ -0.62
Trav16d-dv11A0A075B617 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav16d-dv11A0A075B617 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav16d-dv11A0A075B617 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav16d-dv11A0A075B617 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trav16d-dv11A0A075B617 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav16d-dv11A0A075B617 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav16d-dv11A0A075B617 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav16d-dv11A0A075B617 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trav16d-dv11A0A075B617 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC11.18□□□□□ -0.62
Trav16d-dv11A0A075B617 Mir1199-201ENSMUST00000117015 119 ntBASIC11.18□□□□□ -0.62
Trav16d-dv11A0A075B617 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC11.18□□□□□ -0.62
Trav16d-dv11A0A075B617 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav16d-dv11A0A075B617 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC11.18□□□□□ -0.62
Trav16d-dv11A0A075B617 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Trav16d-dv11A0A075B617 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav16d-dv11A0A075B617 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav16d-dv11A0A075B617 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trav16d-dv11A0A075B617 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav16d-dv11A0A075B617 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav16d-dv11A0A075B617 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav16d-dv11A0A075B617 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav16d-dv11A0A075B617 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav16d-dv11A0A075B617 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Trav16d-dv11A0A075B617 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav16d-dv11A0A075B617 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav16d-dv11A0A075B617 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav16d-dv11A0A075B617 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav16d-dv11A0A075B617 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav16d-dv11A0A075B617 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav16d-dv11A0A075B617 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trav16d-dv11A0A075B617 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav16d-dv11A0A075B617 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav16d-dv11A0A075B617 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav16d-dv11A0A075B617 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trav16d-dv11A0A075B617 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav16d-dv11A0A075B617 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav16d-dv11A0A075B617 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav16d-dv11A0A075B617 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav16d-dv11A0A075B617 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav16d-dv11A0A075B617 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav16d-dv11A0A075B617 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav16d-dv11A0A075B617 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav16d-dv11A0A075B617 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav16d-dv11A0A075B617 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav16d-dv11A0A075B617 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav16d-dv11A0A075B617 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav16d-dv11A0A075B617 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav16d-dv11A0A075B617 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav16d-dv11A0A075B617 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC11.17□□□□□ -0.62
Trav16d-dv11A0A075B617 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav16d-dv11A0A075B617 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Trav16d-dv11A0A075B617 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav16d-dv11A0A075B617 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC11.17□□□□□ -0.62
Trav16d-dv11A0A075B617 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav16d-dv11A0A075B617 Gm43353-201ENSMUST00000199224 1295 ntBASIC11.17□□□□□ -0.62
Trav16d-dv11A0A075B617 Gm30437-201ENSMUST00000206086 1201 ntBASIC11.17□□□□□ -0.62
Trav16d-dv11A0A075B617 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC11.17□□□□□ -0.62
Trav16d-dv11A0A075B617 Gm7367-201ENSMUST00000057611 492 ntBASIC11.17□□□□□ -0.62
Trav16d-dv11A0A075B617 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav16d-dv11A0A075B617 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav16d-dv11A0A075B617 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav16d-dv11A0A075B617 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav16d-dv11A0A075B617 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav16d-dv11A0A075B617 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav16d-dv11A0A075B617 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.17□□□□□ -0.62
Trav16d-dv11A0A075B617 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav16d-dv11A0A075B617 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav16d-dv11A0A075B617 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.17□□□□□ -0.62
Trav16d-dv11A0A075B617 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav16d-dv11A0A075B617 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav16d-dv11A0A075B617 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC11.17□□□□□ -0.62
Trav16d-dv11A0A075B617 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.16□□□□□ -0.62
Trav16d-dv11A0A075B617 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav16d-dv11A0A075B617 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC11.16□□□□□ -0.62
Trav16d-dv11A0A075B617 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Trav16d-dv11A0A075B617 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav16d-dv11A0A075B617 Gm9889-202ENSMUST00000206983 1577 ntBASIC11.16□□□□□ -0.62
Trav16d-dv11A0A075B617 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav16d-dv11A0A075B617 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav16d-dv11A0A075B617 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav16d-dv11A0A075B617 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav16d-dv11A0A075B617 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Trav16d-dv11A0A075B617 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav16d-dv11A0A075B617 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
Trav16d-dv11A0A075B617 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav16d-dv11A0A075B617 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav16d-dv11A0A075B617 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms