Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9-1A0A075B601 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9-1A0A075B601 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9-1A0A075B601 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9-1A0A075B601 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9-1A0A075B601 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trav9-1A0A075B601 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Trav9-1A0A075B601 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9-1A0A075B601 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9-1A0A075B601 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9-1A0A075B601 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC11.88□□□□□ -0.51
Trav9-1A0A075B601 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav9-1A0A075B601 Gm14859-201ENSMUST00000117752 357 ntBASIC11.88□□□□□ -0.51
Trav9-1A0A075B601 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9-1A0A075B601 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC11.88□□□□□ -0.51
Trav9-1A0A075B601 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC11.88□□□□□ -0.51
Trav9-1A0A075B601 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC11.88□□□□□ -0.51
Trav9-1A0A075B601 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC11.88□□□□□ -0.51
Trav9-1A0A075B601 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC11.88□□□□□ -0.51
Trav9-1A0A075B601 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC11.88□□□□□ -0.51
Trav9-1A0A075B601 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9-1A0A075B601 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9-1A0A075B601 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9-1A0A075B601 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9-1A0A075B601 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC11.88□□□□□ -0.51
Trav9-1A0A075B601 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9-1A0A075B601 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9-1A0A075B601 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9-1A0A075B601 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9-1A0A075B601 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9-1A0A075B601 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9-1A0A075B601 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9-1A0A075B601 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC11.88□□□□□ -0.51
Trav9-1A0A075B601 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9-1A0A075B601 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav9-1A0A075B601 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav9-1A0A075B601 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9-1A0A075B601 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9-1A0A075B601 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9-1A0A075B601 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9-1A0A075B601 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9-1A0A075B601 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9-1A0A075B601 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trav9-1A0A075B601 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9-1A0A075B601 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9-1A0A075B601 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9-1A0A075B601 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9-1A0A075B601 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav9-1A0A075B601 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9-1A0A075B601 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9-1A0A075B601 Gm12497-201ENSMUST00000138778 237 ntBASIC11.87□□□□□ -0.51
Trav9-1A0A075B601 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Trav9-1A0A075B601 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav9-1A0A075B601 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav9-1A0A075B601 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav9-1A0A075B601 AC153889.1-201ENSMUST00000219257 330 ntBASIC11.87□□□□□ -0.51
Trav9-1A0A075B601 AC159093.1-201ENSMUST00000227779 380 ntBASIC11.87□□□□□ -0.51
Trav9-1A0A075B601 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trav9-1A0A075B601 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9-1A0A075B601 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9-1A0A075B601 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9-1A0A075B601 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9-1A0A075B601 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9-1A0A075B601 Gm5049-201ENSMUST00000195878 1590 ntBASIC11.87□□□□□ -0.51
Trav9-1A0A075B601 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav9-1A0A075B601 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9-1A0A075B601 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9-1A0A075B601 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9-1A0A075B601 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9-1A0A075B601 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Trav9-1A0A075B601 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav9-1A0A075B601 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9-1A0A075B601 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9-1A0A075B601 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9-1A0A075B601 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC11.86□□□□□ -0.51
Trav9-1A0A075B601 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9-1A0A075B601 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9-1A0A075B601 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC11.86□□□□□ -0.51
Trav9-1A0A075B601 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav9-1A0A075B601 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav9-1A0A075B601 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9-1A0A075B601 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9-1A0A075B601 Gm8344-201ENSMUST00000119813 856 ntBASIC11.86□□□□□ -0.51
Trav9-1A0A075B601 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Trav9-1A0A075B601 Gm7286-201ENSMUST00000182691 1007 ntBASIC11.86□□□□□ -0.51
Trav9-1A0A075B601 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9-1A0A075B601 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9-1A0A075B601 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9-1A0A075B601 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Trav9-1A0A075B601 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9-1A0A075B601 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC11.86□□□□□ -0.51
Trav9-1A0A075B601 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9-1A0A075B601 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9-1A0A075B601 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9-1A0A075B601 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9-1A0A075B601 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9-1A0A075B601 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav9-1A0A075B601 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9-1A0A075B601 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9-1A0A075B601 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms