Protein–RNA interactions for Protein: Q9WTV7

Rlim, E3 ubiquitin-protein ligase RLIM, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RlimQ9WTV7 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RlimQ9WTV7 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RlimQ9WTV7 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.4■□□□□ 0.86
RlimQ9WTV7 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.4■□□□□ 0.86
RlimQ9WTV7 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
RlimQ9WTV7 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
RlimQ9WTV7 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RlimQ9WTV7 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RlimQ9WTV7 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RlimQ9WTV7 Gm4799-201ENSMUST00000095396 657 ntBASIC20.39■□□□□ 0.85
RlimQ9WTV7 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RlimQ9WTV7 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RlimQ9WTV7 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RlimQ9WTV7 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.38■□□□□ 0.85
RlimQ9WTV7 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RlimQ9WTV7 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RlimQ9WTV7 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RlimQ9WTV7 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RlimQ9WTV7 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RlimQ9WTV7 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RlimQ9WTV7 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RlimQ9WTV7 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
RlimQ9WTV7 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.36■□□□□ 0.85
RlimQ9WTV7 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RlimQ9WTV7 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RlimQ9WTV7 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RlimQ9WTV7 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RlimQ9WTV7 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
RlimQ9WTV7 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RlimQ9WTV7 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.34■□□□□ 0.85
RlimQ9WTV7 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RlimQ9WTV7 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.33■□□□□ 0.85
RlimQ9WTV7 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RlimQ9WTV7 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
RlimQ9WTV7 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RlimQ9WTV7 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
RlimQ9WTV7 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.33■□□□□ 0.85
RlimQ9WTV7 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.33■□□□□ 0.85
RlimQ9WTV7 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RlimQ9WTV7 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
RlimQ9WTV7 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RlimQ9WTV7 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RlimQ9WTV7 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RlimQ9WTV7 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.31■□□□□ 0.84
RlimQ9WTV7 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RlimQ9WTV7 Gm7432-201ENSMUST00000210343 879 ntBASIC20.31■□□□□ 0.84
RlimQ9WTV7 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.31■□□□□ 0.84
RlimQ9WTV7 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RlimQ9WTV7 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
RlimQ9WTV7 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RlimQ9WTV7 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RlimQ9WTV7 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RlimQ9WTV7 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RlimQ9WTV7 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RlimQ9WTV7 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RlimQ9WTV7 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RlimQ9WTV7 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RlimQ9WTV7 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
RlimQ9WTV7 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RlimQ9WTV7 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RlimQ9WTV7 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RlimQ9WTV7 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RlimQ9WTV7 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RlimQ9WTV7 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
RlimQ9WTV7 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RlimQ9WTV7 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
RlimQ9WTV7 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
RlimQ9WTV7 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RlimQ9WTV7 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RlimQ9WTV7 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
RlimQ9WTV7 Gm9812-201ENSMUST00000061934 968 ntBASIC20.27■□□□□ 0.84
RlimQ9WTV7 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RlimQ9WTV7 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RlimQ9WTV7 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RlimQ9WTV7 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.26■□□□□ 0.83
RlimQ9WTV7 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.26■□□□□ 0.83
RlimQ9WTV7 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RlimQ9WTV7 Mir3960-201ENSMUST00000198213 73 ntBASIC20.25■□□□□ 0.83
RlimQ9WTV7 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
RlimQ9WTV7 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
RlimQ9WTV7 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RlimQ9WTV7 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RlimQ9WTV7 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RlimQ9WTV7 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RlimQ9WTV7 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RlimQ9WTV7 Gm11599-201ENSMUST00000118720 878 ntBASIC20.24■□□□□ 0.83
RlimQ9WTV7 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RlimQ9WTV7 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.23■□□□□ 0.83
RlimQ9WTV7 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.23■□□□□ 0.83
RlimQ9WTV7 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
RlimQ9WTV7 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.23■□□□□ 0.83
RlimQ9WTV7 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
RlimQ9WTV7 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
RlimQ9WTV7 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RlimQ9WTV7 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.22■□□□□ 0.83
RlimQ9WTV7 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RlimQ9WTV7 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
RlimQ9WTV7 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
RlimQ9WTV7 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RlimQ9WTV7 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms