Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
Scn11aQ9R053 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Scn11aQ9R053 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Scn11aQ9R053 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Scn11aQ9R053 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC27.49■■□□□ 1.99
Scn11aQ9R053 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC27.49■■□□□ 1.99
Scn11aQ9R053 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Scn11aQ9R053 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Scn11aQ9R053 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC27.48■■□□□ 1.99
Scn11aQ9R053 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC27.47■■□□□ 1.99
Scn11aQ9R053 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Scn11aQ9R053 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Scn11aQ9R053 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Scn11aQ9R053 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Scn11aQ9R053 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
Scn11aQ9R053 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC27.45■■□□□ 1.99
Scn11aQ9R053 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC27.45■■□□□ 1.99
Scn11aQ9R053 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC27.45■■□□□ 1.99
Scn11aQ9R053 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Scn11aQ9R053 Gm5067-201ENSMUST00000170449 1009 ntBASIC27.44■■□□□ 1.98
Scn11aQ9R053 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Scn11aQ9R053 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Scn11aQ9R053 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC27.44■■□□□ 1.98
Scn11aQ9R053 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC27.43■■□□□ 1.98
Scn11aQ9R053 Gm15546-201ENSMUST00000122095 826 ntBASIC27.42■■□□□ 1.98
Scn11aQ9R053 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Scn11aQ9R053 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC27.41■■□□□ 1.98
Scn11aQ9R053 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Scn11aQ9R053 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Scn11aQ9R053 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Scn11aQ9R053 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Scn11aQ9R053 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
Scn11aQ9R053 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Scn11aQ9R053 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Scn11aQ9R053 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Scn11aQ9R053 Gm5522-201ENSMUST00000189483 1242 ntBASIC27.4■■□□□ 1.98
Scn11aQ9R053 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Scn11aQ9R053 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Scn11aQ9R053 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Scn11aQ9R053 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC27.38■■□□□ 1.97
Scn11aQ9R053 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC27.37■■□□□ 1.97
Scn11aQ9R053 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Scn11aQ9R053 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
Scn11aQ9R053 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
Scn11aQ9R053 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Scn11aQ9R053 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
Scn11aQ9R053 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC27.35■■□□□ 1.97
Scn11aQ9R053 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
Scn11aQ9R053 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC27.34■■□□□ 1.97
Scn11aQ9R053 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
Scn11aQ9R053 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Scn11aQ9R053 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC27.33■■□□□ 1.97
Scn11aQ9R053 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
Scn11aQ9R053 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Scn11aQ9R053 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Scn11aQ9R053 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
Scn11aQ9R053 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Scn11aQ9R053 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Scn11aQ9R053 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Scn11aQ9R053 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC27.3■■□□□ 1.96
Scn11aQ9R053 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Scn11aQ9R053 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC27.29■■□□□ 1.96
Scn11aQ9R053 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Scn11aQ9R053 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
Scn11aQ9R053 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
Scn11aQ9R053 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
Scn11aQ9R053 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Scn11aQ9R053 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
Scn11aQ9R053 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Scn11aQ9R053 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
Scn11aQ9R053 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Scn11aQ9R053 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
Scn11aQ9R053 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC27.26■■□□□ 1.95
Scn11aQ9R053 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Scn11aQ9R053 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Scn11aQ9R053 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
Scn11aQ9R053 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
Scn11aQ9R053 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Scn11aQ9R053 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
Scn11aQ9R053 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Scn11aQ9R053 Gm43592-201ENSMUST00000196922 1165 ntBASIC27.24■■□□□ 1.95
Scn11aQ9R053 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Scn11aQ9R053 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC27.24■■□□□ 1.95
Scn11aQ9R053 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
Scn11aQ9R053 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Scn11aQ9R053 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Scn11aQ9R053 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Scn11aQ9R053 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Scn11aQ9R053 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
Scn11aQ9R053 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC27.22■■□□□ 1.95
Scn11aQ9R053 AC093043.1-201ENSMUST00000226700 898 ntBASIC27.22■■□□□ 1.95
Scn11aQ9R053 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Scn11aQ9R053 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC27.22■■□□□ 1.95
Scn11aQ9R053 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Scn11aQ9R053 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Scn11aQ9R053 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC27.21■■□□□ 1.95
Scn11aQ9R053 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Scn11aQ9R053 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Scn11aQ9R053 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.95
Scn11aQ9R053 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms