Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
Rfx5Q9JL61 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
Rfx5Q9JL61 Gm42699-201ENSMUST00000198104 1657 ntBASIC24.05■■□□□ 1.44
Rfx5Q9JL61 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC24.04■■□□□ 1.44
Rfx5Q9JL61 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Rfx5Q9JL61 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Rfx5Q9JL61 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Rfx5Q9JL61 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rfx5Q9JL61 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC24.03■■□□□ 1.44
Rfx5Q9JL61 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rfx5Q9JL61 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rfx5Q9JL61 AC164433.2-201ENSMUST00000226346 1701 ntBASIC24.02■■□□□ 1.44
Rfx5Q9JL61 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rfx5Q9JL61 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rfx5Q9JL61 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rfx5Q9JL61 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rfx5Q9JL61 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rfx5Q9JL61 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rfx5Q9JL61 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rfx5Q9JL61 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Rfx5Q9JL61 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC24■■□□□ 1.43
Rfx5Q9JL61 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rfx5Q9JL61 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rfx5Q9JL61 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Rfx5Q9JL61 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Rfx5Q9JL61 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Rfx5Q9JL61 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC23.98■■□□□ 1.43
Rfx5Q9JL61 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Rfx5Q9JL61 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Rfx5Q9JL61 Gm27502-201ENSMUST00000183495 199 ntBASIC23.97■■□□□ 1.43
Rfx5Q9JL61 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
Rfx5Q9JL61 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Rfx5Q9JL61 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Rfx5Q9JL61 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
Rfx5Q9JL61 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rfx5Q9JL61 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
Rfx5Q9JL61 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Rfx5Q9JL61 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC23.95■■□□□ 1.42
Rfx5Q9JL61 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Rfx5Q9JL61 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC23.95■■□□□ 1.42
Rfx5Q9JL61 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Rfx5Q9JL61 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC23.93■■□□□ 1.42
Rfx5Q9JL61 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Rfx5Q9JL61 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Rfx5Q9JL61 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.93■■□□□ 1.42
Rfx5Q9JL61 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Rfx5Q9JL61 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Rfx5Q9JL61 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Rfx5Q9JL61 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Rfx5Q9JL61 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Rfx5Q9JL61 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Rfx5Q9JL61 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Rfx5Q9JL61 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Rfx5Q9JL61 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Rfx5Q9JL61 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC23.91■■□□□ 1.42
Rfx5Q9JL61 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Rfx5Q9JL61 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC23.91■■□□□ 1.42
Rfx5Q9JL61 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Rfx5Q9JL61 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Rfx5Q9JL61 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Rfx5Q9JL61 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Rfx5Q9JL61 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Rfx5Q9JL61 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Rfx5Q9JL61 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC23.9■■□□□ 1.42
Rfx5Q9JL61 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Rfx5Q9JL61 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Rfx5Q9JL61 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
Rfx5Q9JL61 Gm44428-201ENSMUST00000204474 874 ntBASIC23.89■■□□□ 1.41
Rfx5Q9JL61 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC23.89■■□□□ 1.41
Rfx5Q9JL61 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Rfx5Q9JL61 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Rfx5Q9JL61 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC23.88■■□□□ 1.41
Rfx5Q9JL61 Gm12366-201ENSMUST00000121722 873 ntBASIC23.88■■□□□ 1.41
Rfx5Q9JL61 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC23.88■■□□□ 1.41
Rfx5Q9JL61 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Rfx5Q9JL61 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC23.88■■□□□ 1.41
Rfx5Q9JL61 Gm5786-201ENSMUST00000085368 882 ntBASIC23.88■■□□□ 1.41
Rfx5Q9JL61 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
Rfx5Q9JL61 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Rfx5Q9JL61 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Rfx5Q9JL61 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rfx5Q9JL61 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC23.87■■□□□ 1.41
Rfx5Q9JL61 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rfx5Q9JL61 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rfx5Q9JL61 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Rfx5Q9JL61 Cap2-205ENSMUST00000225824 1634 ntBASIC23.86■■□□□ 1.41
Rfx5Q9JL61 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC23.86■■□□□ 1.41
Rfx5Q9JL61 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rfx5Q9JL61 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC23.86■■□□□ 1.41
Rfx5Q9JL61 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC23.86■■□□□ 1.41
Rfx5Q9JL61 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rfx5Q9JL61 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC23.86■■□□□ 1.41
Rfx5Q9JL61 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Rfx5Q9JL61 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Rfx5Q9JL61 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Rfx5Q9JL61 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Rfx5Q9JL61 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC23.85■■□□□ 1.41
Rfx5Q9JL61 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Rfx5Q9JL61 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
Rfx5Q9JL61 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC23.85■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms