Protein–RNA interactions for Protein: Q9ET35

Tnfrsf13b, Tumor necrosis factor receptor superfamily member 13B, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13bQ9ET35 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tnfrsf13bQ9ET35 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
Tnfrsf13bQ9ET35 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Tnfrsf13bQ9ET35 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.77■□□□□ 0.44
Tnfrsf13bQ9ET35 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tnfrsf13bQ9ET35 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tnfrsf13bQ9ET35 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tnfrsf13bQ9ET35 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tnfrsf13bQ9ET35 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Tnfrsf13bQ9ET35 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tnfrsf13bQ9ET35 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tnfrsf13bQ9ET35 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tnfrsf13bQ9ET35 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tnfrsf13bQ9ET35 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tnfrsf13bQ9ET35 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tnfrsf13bQ9ET35 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.73■□□□□ 0.43
Tnfrsf13bQ9ET35 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Tnfrsf13bQ9ET35 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Tnfrsf13bQ9ET35 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
Tnfrsf13bQ9ET35 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tnfrsf13bQ9ET35 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfrsf13bQ9ET35 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfrsf13bQ9ET35 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Tnfrsf13bQ9ET35 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfrsf13bQ9ET35 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC17.72■□□□□ 0.43
Tnfrsf13bQ9ET35 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfrsf13bQ9ET35 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tnfrsf13bQ9ET35 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC17.71■□□□□ 0.43
Tnfrsf13bQ9ET35 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tnfrsf13bQ9ET35 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tnfrsf13bQ9ET35 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tnfrsf13bQ9ET35 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Tnfrsf13bQ9ET35 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.71■□□□□ 0.43
Tnfrsf13bQ9ET35 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Tnfrsf13bQ9ET35 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC17.7■□□□□ 0.42
Tnfrsf13bQ9ET35 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfrsf13bQ9ET35 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC17.7■□□□□ 0.42
Tnfrsf13bQ9ET35 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfrsf13bQ9ET35 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfrsf13bQ9ET35 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfrsf13bQ9ET35 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tnfrsf13bQ9ET35 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tnfrsf13bQ9ET35 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tnfrsf13bQ9ET35 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC17.69■□□□□ 0.42
Tnfrsf13bQ9ET35 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.69■□□□□ 0.42
Tnfrsf13bQ9ET35 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tnfrsf13bQ9ET35 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Tnfrsf13bQ9ET35 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnfrsf13bQ9ET35 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Tnfrsf13bQ9ET35 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tnfrsf13bQ9ET35 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tnfrsf13bQ9ET35 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.68■□□□□ 0.42
Tnfrsf13bQ9ET35 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.68■□□□□ 0.42
Tnfrsf13bQ9ET35 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf13bQ9ET35 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf13bQ9ET35 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf13bQ9ET35 Gm37136-201ENSMUST00000194368 194 ntBASIC17.67■□□□□ 0.42
Tnfrsf13bQ9ET35 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tnfrsf13bQ9ET35 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfrsf13bQ9ET35 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfrsf13bQ9ET35 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Tnfrsf13bQ9ET35 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tnfrsf13bQ9ET35 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tnfrsf13bQ9ET35 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Tnfrsf13bQ9ET35 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.65■□□□□ 0.42
Tnfrsf13bQ9ET35 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.65■□□□□ 0.42
Tnfrsf13bQ9ET35 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tnfrsf13bQ9ET35 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Tnfrsf13bQ9ET35 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.64■□□□□ 0.41
Tnfrsf13bQ9ET35 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Tnfrsf13bQ9ET35 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Tnfrsf13bQ9ET35 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tnfrsf13bQ9ET35 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tnfrsf13bQ9ET35 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tnfrsf13bQ9ET35 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tnfrsf13bQ9ET35 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tnfrsf13bQ9ET35 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tnfrsf13bQ9ET35 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Tnfrsf13bQ9ET35 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC17.63■□□□□ 0.41
Tnfrsf13bQ9ET35 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tnfrsf13bQ9ET35 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.63■□□□□ 0.41
Tnfrsf13bQ9ET35 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tnfrsf13bQ9ET35 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tnfrsf13bQ9ET35 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tnfrsf13bQ9ET35 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.62■□□□□ 0.41
Tnfrsf13bQ9ET35 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tnfrsf13bQ9ET35 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Tnfrsf13bQ9ET35 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Tnfrsf13bQ9ET35 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnfrsf13bQ9ET35 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tnfrsf13bQ9ET35 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.61■□□□□ 0.41
Tnfrsf13bQ9ET35 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnfrsf13bQ9ET35 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.61■□□□□ 0.41
Tnfrsf13bQ9ET35 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnfrsf13bQ9ET35 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnfrsf13bQ9ET35 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnfrsf13bQ9ET35 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnfrsf13bQ9ET35 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Tnfrsf13bQ9ET35 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Tnfrsf13bQ9ET35 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms